Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vcpip1Q8CDG3 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vcpip1Q8CDG3 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Vcpip1Q8CDG3 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vcpip1Q8CDG3 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vcpip1Q8CDG3 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
Vcpip1Q8CDG3 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vcpip1Q8CDG3 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vcpip1Q8CDG3 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Vcpip1Q8CDG3 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.78■□□□□ 0.6
Vcpip1Q8CDG3 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vcpip1Q8CDG3 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.78■□□□□ 0.6
Vcpip1Q8CDG3 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vcpip1Q8CDG3 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Vcpip1Q8CDG3 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.77■□□□□ 0.6
Vcpip1Q8CDG3 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Vcpip1Q8CDG3 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vcpip1Q8CDG3 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vcpip1Q8CDG3 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vcpip1Q8CDG3 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vcpip1Q8CDG3 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.77■□□□□ 0.6
Vcpip1Q8CDG3 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vcpip1Q8CDG3 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Vcpip1Q8CDG3 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.77■□□□□ 0.6
Vcpip1Q8CDG3 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vcpip1Q8CDG3 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vcpip1Q8CDG3 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vcpip1Q8CDG3 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Vcpip1Q8CDG3 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vcpip1Q8CDG3 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Vcpip1Q8CDG3 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vcpip1Q8CDG3 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Vcpip1Q8CDG3 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Vcpip1Q8CDG3 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vcpip1Q8CDG3 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vcpip1Q8CDG3 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vcpip1Q8CDG3 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vcpip1Q8CDG3 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Vcpip1Q8CDG3 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Vcpip1Q8CDG3 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Vcpip1Q8CDG3 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.76■□□□□ 0.59
Vcpip1Q8CDG3 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Vcpip1Q8CDG3 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vcpip1Q8CDG3 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vcpip1Q8CDG3 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vcpip1Q8CDG3 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Vcpip1Q8CDG3 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vcpip1Q8CDG3 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Vcpip1Q8CDG3 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vcpip1Q8CDG3 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vcpip1Q8CDG3 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vcpip1Q8CDG3 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vcpip1Q8CDG3 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Vcpip1Q8CDG3 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.75■□□□□ 0.59
Vcpip1Q8CDG3 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.75■□□□□ 0.59
Vcpip1Q8CDG3 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Vcpip1Q8CDG3 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.75■□□□□ 0.59
Vcpip1Q8CDG3 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.75■□□□□ 0.59
Vcpip1Q8CDG3 Gm12527-201ENSMUST00000117967 564 ntBASIC18.75■□□□□ 0.59
Vcpip1Q8CDG3 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Vcpip1Q8CDG3 Mir7071-201ENSMUST00000184847 69 ntBASIC18.75■□□□□ 0.59
Vcpip1Q8CDG3 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.75■□□□□ 0.59
Vcpip1Q8CDG3 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Vcpip1Q8CDG3 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Vcpip1Q8CDG3 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Vcpip1Q8CDG3 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vcpip1Q8CDG3 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vcpip1Q8CDG3 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vcpip1Q8CDG3 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vcpip1Q8CDG3 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Vcpip1Q8CDG3 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vcpip1Q8CDG3 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vcpip1Q8CDG3 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vcpip1Q8CDG3 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.74■□□□□ 0.59
Vcpip1Q8CDG3 Gm11927-201ENSMUST00000118472 759 ntBASIC18.74■□□□□ 0.59
Vcpip1Q8CDG3 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.74■□□□□ 0.59
Vcpip1Q8CDG3 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Vcpip1Q8CDG3 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
Vcpip1Q8CDG3 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vcpip1Q8CDG3 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vcpip1Q8CDG3 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Vcpip1Q8CDG3 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.74■□□□□ 0.59
Vcpip1Q8CDG3 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vcpip1Q8CDG3 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Vcpip1Q8CDG3 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vcpip1Q8CDG3 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Vcpip1Q8CDG3 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Vcpip1Q8CDG3 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vcpip1Q8CDG3 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vcpip1Q8CDG3 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vcpip1Q8CDG3 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.73■□□□□ 0.59
Vcpip1Q8CDG3 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Vcpip1Q8CDG3 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vcpip1Q8CDG3 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.73■□□□□ 0.59
Vcpip1Q8CDG3 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vcpip1Q8CDG3 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vcpip1Q8CDG3 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vcpip1Q8CDG3 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Vcpip1Q8CDG3 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Vcpip1Q8CDG3 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms