Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Lysmd4Q8CC84 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lysmd4Q8CC84 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lysmd4Q8CC84 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.7■□□□□ 0.1
Lysmd4Q8CC84 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lysmd4Q8CC84 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
Lysmd4Q8CC84 Gm42778-201ENSMUST00000199644 553 ntBASIC15.7■□□□□ 0.1
Lysmd4Q8CC84 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Lysmd4Q8CC84 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lysmd4Q8CC84 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lysmd4Q8CC84 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lysmd4Q8CC84 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lysmd4Q8CC84 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lysmd4Q8CC84 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lysmd4Q8CC84 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lysmd4Q8CC84 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lysmd4Q8CC84 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lysmd4Q8CC84 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Lysmd4Q8CC84 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lysmd4Q8CC84 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lysmd4Q8CC84 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lysmd4Q8CC84 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lysmd4Q8CC84 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Lysmd4Q8CC84 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lysmd4Q8CC84 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lysmd4Q8CC84 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lysmd4Q8CC84 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lysmd4Q8CC84 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lysmd4Q8CC84 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lysmd4Q8CC84 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lysmd4Q8CC84 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Lysmd4Q8CC84 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lysmd4Q8CC84 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Lysmd4Q8CC84 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Lysmd4Q8CC84 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.68■□□□□ 0.1
Lysmd4Q8CC84 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC15.68■□□□□ 0.1
Lysmd4Q8CC84 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC15.68■□□□□ 0.1
Lysmd4Q8CC84 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lysmd4Q8CC84 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lysmd4Q8CC84 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lysmd4Q8CC84 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lysmd4Q8CC84 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.68■□□□□ 0.1
Lysmd4Q8CC84 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Lysmd4Q8CC84 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lysmd4Q8CC84 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lysmd4Q8CC84 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lysmd4Q8CC84 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lysmd4Q8CC84 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lysmd4Q8CC84 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lysmd4Q8CC84 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC15.67■□□□□ 0.1
Lysmd4Q8CC84 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.67■□□□□ 0.1
Lysmd4Q8CC84 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Lysmd4Q8CC84 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lysmd4Q8CC84 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lysmd4Q8CC84 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Lysmd4Q8CC84 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC15.67■□□□□ 0.1
Lysmd4Q8CC84 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Lysmd4Q8CC84 Gm38285-201ENSMUST00000192928 922 ntBASIC15.67■□□□□ 0.1
Lysmd4Q8CC84 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lysmd4Q8CC84 Gm10493-201ENSMUST00000097270 612 ntBASIC15.67■□□□□ 0.1
Lysmd4Q8CC84 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Lysmd4Q8CC84 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lysmd4Q8CC84 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Lysmd4Q8CC84 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lysmd4Q8CC84 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lysmd4Q8CC84 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lysmd4Q8CC84 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lysmd4Q8CC84 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lysmd4Q8CC84 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Lysmd4Q8CC84 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.66■□□□□ 0.1
Lysmd4Q8CC84 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lysmd4Q8CC84 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lysmd4Q8CC84 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lysmd4Q8CC84 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lysmd4Q8CC84 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lysmd4Q8CC84 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.66■□□□□ 0.1
Lysmd4Q8CC84 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Lysmd4Q8CC84 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC15.66■□□□□ 0.1
Lysmd4Q8CC84 Ap3s1-204ENSMUST00000225520 957 ntBASIC15.66■□□□□ 0.1
Lysmd4Q8CC84 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Lysmd4Q8CC84 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lysmd4Q8CC84 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lysmd4Q8CC84 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lysmd4Q8CC84 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Lysmd4Q8CC84 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lysmd4Q8CC84 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Lysmd4Q8CC84 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lysmd4Q8CC84 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Lysmd4Q8CC84 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lysmd4Q8CC84 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lysmd4Q8CC84 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lysmd4Q8CC84 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lysmd4Q8CC84 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lysmd4Q8CC84 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lysmd4Q8CC84 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lysmd4Q8CC84 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lysmd4Q8CC84 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lysmd4Q8CC84 AC099934.2-201ENSMUST00000196389 70 ntBASIC15.65■□□□□ 0.1
Lysmd4Q8CC84 AC156953.1-201ENSMUST00000196953 70 ntBASIC15.65■□□□□ 0.1
Lysmd4Q8CC84 AC157822.2-201ENSMUST00000200291 70 ntBASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms