Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Alx1Q8C8B0 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Alx1Q8C8B0 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Alx1Q8C8B0 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Alx1Q8C8B0 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Alx1Q8C8B0 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Alx1Q8C8B0 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Alx1Q8C8B0 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Alx1Q8C8B0 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Alx1Q8C8B0 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
Alx1Q8C8B0 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.43■□□□□ 0.86
Alx1Q8C8B0 Gm27463-201ENSMUST00000183569 57 ntBASIC20.43■□□□□ 0.86
Alx1Q8C8B0 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC20.43■□□□□ 0.86
Alx1Q8C8B0 Gm7791-201ENSMUST00000219066 539 ntBASIC20.43■□□□□ 0.86
Alx1Q8C8B0 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Alx1Q8C8B0 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Alx1Q8C8B0 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Alx1Q8C8B0 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Alx1Q8C8B0 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Alx1Q8C8B0 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Alx1Q8C8B0 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Alx1Q8C8B0 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Alx1Q8C8B0 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Alx1Q8C8B0 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Alx1Q8C8B0 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Alx1Q8C8B0 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Alx1Q8C8B0 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC20.42■□□□□ 0.86
Alx1Q8C8B0 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Alx1Q8C8B0 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Alx1Q8C8B0 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Alx1Q8C8B0 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Alx1Q8C8B0 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Alx1Q8C8B0 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.41■□□□□ 0.86
Alx1Q8C8B0 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Alx1Q8C8B0 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Alx1Q8C8B0 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Alx1Q8C8B0 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Alx1Q8C8B0 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Alx1Q8C8B0 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC20.41■□□□□ 0.86
Alx1Q8C8B0 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Alx1Q8C8B0 Gm43799-201ENSMUST00000201845 579 ntBASIC20.41■□□□□ 0.86
Alx1Q8C8B0 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Alx1Q8C8B0 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Alx1Q8C8B0 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Alx1Q8C8B0 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Alx1Q8C8B0 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Alx1Q8C8B0 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Alx1Q8C8B0 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.41■□□□□ 0.86
Alx1Q8C8B0 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Alx1Q8C8B0 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.4■□□□□ 0.86
Alx1Q8C8B0 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Alx1Q8C8B0 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
Alx1Q8C8B0 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Alx1Q8C8B0 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Alx1Q8C8B0 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Alx1Q8C8B0 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Alx1Q8C8B0 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Alx1Q8C8B0 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Alx1Q8C8B0 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Alx1Q8C8B0 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.4■□□□□ 0.86
Alx1Q8C8B0 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Alx1Q8C8B0 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Alx1Q8C8B0 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Alx1Q8C8B0 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Alx1Q8C8B0 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Alx1Q8C8B0 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Alx1Q8C8B0 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Alx1Q8C8B0 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Alx1Q8C8B0 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Alx1Q8C8B0 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC20.39■□□□□ 0.85
Alx1Q8C8B0 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Alx1Q8C8B0 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Alx1Q8C8B0 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Alx1Q8C8B0 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Alx1Q8C8B0 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Alx1Q8C8B0 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Alx1Q8C8B0 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC20.39■□□□□ 0.85
Alx1Q8C8B0 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Alx1Q8C8B0 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Alx1Q8C8B0 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Alx1Q8C8B0 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Alx1Q8C8B0 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Alx1Q8C8B0 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Alx1Q8C8B0 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Alx1Q8C8B0 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC20.38■□□□□ 0.85
Alx1Q8C8B0 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Alx1Q8C8B0 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20.38■□□□□ 0.85
Alx1Q8C8B0 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.38■□□□□ 0.85
Alx1Q8C8B0 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Alx1Q8C8B0 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Alx1Q8C8B0 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Alx1Q8C8B0 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Alx1Q8C8B0 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Alx1Q8C8B0 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
Alx1Q8C8B0 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Alx1Q8C8B0 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
Alx1Q8C8B0 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
Alx1Q8C8B0 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Alx1Q8C8B0 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Alx1Q8C8B0 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms