Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps9d1Q8C190 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps9d1Q8C190 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Vps9d1Q8C190 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Vps9d1Q8C190 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps9d1Q8C190 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps9d1Q8C190 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps9d1Q8C190 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vps9d1Q8C190 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps9d1Q8C190 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.38■□□□□ 0.21
Vps9d1Q8C190 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps9d1Q8C190 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps9d1Q8C190 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps9d1Q8C190 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps9d1Q8C190 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Vps9d1Q8C190 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Vps9d1Q8C190 Gm7290-201ENSMUST00000104990 617 ntBASIC16.37■□□□□ 0.21
Vps9d1Q8C190 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps9d1Q8C190 Gm12918-201ENSMUST00000120234 636 ntBASIC16.37■□□□□ 0.21
Vps9d1Q8C190 Gm15710-201ENSMUST00000121821 636 ntBASIC16.37■□□□□ 0.21
Vps9d1Q8C190 Gm5075-201ENSMUST00000196916 622 ntBASIC16.37■□□□□ 0.21
Vps9d1Q8C190 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps9d1Q8C190 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.37■□□□□ 0.21
Vps9d1Q8C190 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps9d1Q8C190 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.37■□□□□ 0.21
Vps9d1Q8C190 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.37■□□□□ 0.21
Vps9d1Q8C190 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Vps9d1Q8C190 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Vps9d1Q8C190 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps9d1Q8C190 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps9d1Q8C190 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Vps9d1Q8C190 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps9d1Q8C190 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps9d1Q8C190 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.36■□□□□ 0.21
Vps9d1Q8C190 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps9d1Q8C190 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.36■□□□□ 0.21
Vps9d1Q8C190 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps9d1Q8C190 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Vps9d1Q8C190 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.36■□□□□ 0.21
Vps9d1Q8C190 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps9d1Q8C190 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
Vps9d1Q8C190 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps9d1Q8C190 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Vps9d1Q8C190 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps9d1Q8C190 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps9d1Q8C190 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.36■□□□□ 0.21
Vps9d1Q8C190 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps9d1Q8C190 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.36■□□□□ 0.21
Vps9d1Q8C190 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps9d1Q8C190 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.36■□□□□ 0.21
Vps9d1Q8C190 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps9d1Q8C190 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps9d1Q8C190 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps9d1Q8C190 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Vps9d1Q8C190 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps9d1Q8C190 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps9d1Q8C190 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps9d1Q8C190 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.35■□□□□ 0.21
Vps9d1Q8C190 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.35■□□□□ 0.21
Vps9d1Q8C190 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Vps9d1Q8C190 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps9d1Q8C190 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps9d1Q8C190 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps9d1Q8C190 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps9d1Q8C190 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.35■□□□□ 0.21
Vps9d1Q8C190 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Vps9d1Q8C190 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.35■□□□□ 0.21
Vps9d1Q8C190 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps9d1Q8C190 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Vps9d1Q8C190 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps9d1Q8C190 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Vps9d1Q8C190 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.35■□□□□ 0.21
Vps9d1Q8C190 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps9d1Q8C190 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Vps9d1Q8C190 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Vps9d1Q8C190 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.35■□□□□ 0.21
Vps9d1Q8C190 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.35■□□□□ 0.21
Vps9d1Q8C190 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps9d1Q8C190 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vps9d1Q8C190 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps9d1Q8C190 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps9d1Q8C190 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps9d1Q8C190 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.34■□□□□ 0.21
Vps9d1Q8C190 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps9d1Q8C190 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.34■□□□□ 0.21
Vps9d1Q8C190 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Vps9d1Q8C190 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.34■□□□□ 0.21
Vps9d1Q8C190 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.34■□□□□ 0.21
Vps9d1Q8C190 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps9d1Q8C190 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Vps9d1Q8C190 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vps9d1Q8C190 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps9d1Q8C190 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps9d1Q8C190 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vps9d1Q8C190 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps9d1Q8C190 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.34■□□□□ 0.21
Vps9d1Q8C190 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps9d1Q8C190 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps9d1Q8C190 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Vps9d1Q8C190 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms