Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.7■□□□□ 0.42
Usp43Q8BUM9 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Usp43Q8BUM9 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp43Q8BUM9 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp43Q8BUM9 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp43Q8BUM9 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp43Q8BUM9 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp43Q8BUM9 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Usp43Q8BUM9 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.7■□□□□ 0.42
Usp43Q8BUM9 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp43Q8BUM9 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Usp43Q8BUM9 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.69■□□□□ 0.42
Usp43Q8BUM9 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp43Q8BUM9 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp43Q8BUM9 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp43Q8BUM9 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Usp43Q8BUM9 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Usp43Q8BUM9 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp43Q8BUM9 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.69■□□□□ 0.42
Usp43Q8BUM9 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Usp43Q8BUM9 Gm4974-201ENSMUST00000209974 875 ntBASIC17.69■□□□□ 0.42
Usp43Q8BUM9 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp43Q8BUM9 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp43Q8BUM9 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp43Q8BUM9 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Usp43Q8BUM9 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Usp43Q8BUM9 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp43Q8BUM9 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.68■□□□□ 0.42
Usp43Q8BUM9 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp43Q8BUM9 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.68■□□□□ 0.42
Usp43Q8BUM9 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.68■□□□□ 0.42
Usp43Q8BUM9 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Usp43Q8BUM9 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp43Q8BUM9 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp43Q8BUM9 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Usp43Q8BUM9 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.68■□□□□ 0.42
Usp43Q8BUM9 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp43Q8BUM9 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Usp43Q8BUM9 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.68■□□□□ 0.42
Usp43Q8BUM9 Gm10517-202ENSMUST00000192970 758 ntBASIC17.68■□□□□ 0.42
Usp43Q8BUM9 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp43Q8BUM9 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp43Q8BUM9 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Usp43Q8BUM9 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.68■□□□□ 0.42
Usp43Q8BUM9 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Usp43Q8BUM9 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Usp43Q8BUM9 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Usp43Q8BUM9 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp43Q8BUM9 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp43Q8BUM9 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp43Q8BUM9 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp43Q8BUM9 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Usp43Q8BUM9 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Usp43Q8BUM9 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp43Q8BUM9 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp43Q8BUM9 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Usp43Q8BUM9 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp43Q8BUM9 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.67■□□□□ 0.42
Usp43Q8BUM9 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp43Q8BUM9 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp43Q8BUM9 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Usp43Q8BUM9 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp43Q8BUM9 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Usp43Q8BUM9 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp43Q8BUM9 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Usp43Q8BUM9 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.66■□□□□ 0.42
Usp43Q8BUM9 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp43Q8BUM9 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Usp43Q8BUM9 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Usp43Q8BUM9 Gm8520-201ENSMUST00000186517 868 ntBASIC17.66■□□□□ 0.42
Usp43Q8BUM9 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.66■□□□□ 0.42
Usp43Q8BUM9 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp43Q8BUM9 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp43Q8BUM9 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp43Q8BUM9 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp43Q8BUM9 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Usp43Q8BUM9 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Usp43Q8BUM9 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp43Q8BUM9 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp43Q8BUM9 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Usp43Q8BUM9 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Usp43Q8BUM9 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Usp43Q8BUM9 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.65■□□□□ 0.42
Usp43Q8BUM9 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp43Q8BUM9 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Usp43Q8BUM9 Gm27011-201ENSMUST00000182352 972 ntBASIC17.65■□□□□ 0.42
Usp43Q8BUM9 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp43Q8BUM9 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp43Q8BUM9 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp43Q8BUM9 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp43Q8BUM9 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Usp43Q8BUM9 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp43Q8BUM9 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Usp43Q8BUM9 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Usp43Q8BUM9 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Usp43Q8BUM9 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.64■□□□□ 0.41
Usp43Q8BUM9 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp43Q8BUM9 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp43Q8BUM9 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp43Q8BUM9 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms