Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cpne3Q8BT60 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpne3Q8BT60 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cpne3Q8BT60 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpne3Q8BT60 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Cpne3Q8BT60 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpne3Q8BT60 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpne3Q8BT60 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpne3Q8BT60 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.89■□□□□ 0.29
Cpne3Q8BT60 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Cpne3Q8BT60 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpne3Q8BT60 Gm8969-201ENSMUST00000199694 526 ntBASIC16.89■□□□□ 0.29
Cpne3Q8BT60 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.89■□□□□ 0.29
Cpne3Q8BT60 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpne3Q8BT60 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpne3Q8BT60 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cpne3Q8BT60 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.89■□□□□ 0.29
Cpne3Q8BT60 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpne3Q8BT60 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpne3Q8BT60 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpne3Q8BT60 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.89■□□□□ 0.29
Cpne3Q8BT60 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cpne3Q8BT60 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.88■□□□□ 0.29
Cpne3Q8BT60 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.88■□□□□ 0.29
Cpne3Q8BT60 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpne3Q8BT60 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpne3Q8BT60 Gm38285-201ENSMUST00000192928 922 ntBASIC16.88■□□□□ 0.29
Cpne3Q8BT60 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Cpne3Q8BT60 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpne3Q8BT60 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpne3Q8BT60 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.88■□□□□ 0.29
Cpne3Q8BT60 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpne3Q8BT60 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpne3Q8BT60 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Cpne3Q8BT60 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpne3Q8BT60 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpne3Q8BT60 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpne3Q8BT60 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Cpne3Q8BT60 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpne3Q8BT60 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpne3Q8BT60 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpne3Q8BT60 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cpne3Q8BT60 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpne3Q8BT60 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.87■□□□□ 0.29
Cpne3Q8BT60 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cpne3Q8BT60 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpne3Q8BT60 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC16.87■□□□□ 0.29
Cpne3Q8BT60 Gm26524-201ENSMUST00000192339 390 ntBASIC16.87■□□□□ 0.29
Cpne3Q8BT60 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cpne3Q8BT60 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpne3Q8BT60 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpne3Q8BT60 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cpne3Q8BT60 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpne3Q8BT60 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpne3Q8BT60 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpne3Q8BT60 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpne3Q8BT60 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cpne3Q8BT60 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpne3Q8BT60 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpne3Q8BT60 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpne3Q8BT60 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpne3Q8BT60 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpne3Q8BT60 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpne3Q8BT60 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpne3Q8BT60 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpne3Q8BT60 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpne3Q8BT60 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpne3Q8BT60 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpne3Q8BT60 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpne3Q8BT60 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Cpne3Q8BT60 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpne3Q8BT60 Rab3c-203ENSMUST00000224180 967 ntBASIC16.86■□□□□ 0.29
Cpne3Q8BT60 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpne3Q8BT60 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cpne3Q8BT60 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cpne3Q8BT60 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Cpne3Q8BT60 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.86■□□□□ 0.29
Cpne3Q8BT60 Flg-201ENSMUST00000050758 1488 ntBASIC16.86■□□□□ 0.29
Cpne3Q8BT60 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cpne3Q8BT60 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpne3Q8BT60 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpne3Q8BT60 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpne3Q8BT60 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpne3Q8BT60 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpne3Q8BT60 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpne3Q8BT60 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Cpne3Q8BT60 Gm5408-201ENSMUST00000197998 747 ntBASIC16.85■□□□□ 0.29
Cpne3Q8BT60 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.85■□□□□ 0.29
Cpne3Q8BT60 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.85■□□□□ 0.29
Cpne3Q8BT60 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Cpne3Q8BT60 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cpne3Q8BT60 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Cpne3Q8BT60 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpne3Q8BT60 Zfp783-201ENSMUST00000095946 670 ntBASIC16.85■□□□□ 0.29
Cpne3Q8BT60 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpne3Q8BT60 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpne3Q8BT60 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpne3Q8BT60 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cpne3Q8BT60 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cpne3Q8BT60 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms