Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scfd1Q8BRF7 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Scfd1Q8BRF7 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scfd1Q8BRF7 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scfd1Q8BRF7 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scfd1Q8BRF7 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Scfd1Q8BRF7 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC19.99■□□□□ 0.79
Scfd1Q8BRF7 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Scfd1Q8BRF7 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.99■□□□□ 0.79
Scfd1Q8BRF7 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scfd1Q8BRF7 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scfd1Q8BRF7 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Scfd1Q8BRF7 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scfd1Q8BRF7 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scfd1Q8BRF7 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scfd1Q8BRF7 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.99■□□□□ 0.79
Scfd1Q8BRF7 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scfd1Q8BRF7 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Scfd1Q8BRF7 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Scfd1Q8BRF7 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.98■□□□□ 0.79
Scfd1Q8BRF7 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
Scfd1Q8BRF7 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.98■□□□□ 0.79
Scfd1Q8BRF7 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scfd1Q8BRF7 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
Scfd1Q8BRF7 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scfd1Q8BRF7 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.98■□□□□ 0.79
Scfd1Q8BRF7 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Scfd1Q8BRF7 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Scfd1Q8BRF7 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scfd1Q8BRF7 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Scfd1Q8BRF7 AA414768-201ENSMUST00000121924 1257 ntBASIC19.98■□□□□ 0.79
Scfd1Q8BRF7 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Scfd1Q8BRF7 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Scfd1Q8BRF7 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Scfd1Q8BRF7 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scfd1Q8BRF7 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Scfd1Q8BRF7 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Scfd1Q8BRF7 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scfd1Q8BRF7 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scfd1Q8BRF7 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scfd1Q8BRF7 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scfd1Q8BRF7 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scfd1Q8BRF7 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Scfd1Q8BRF7 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scfd1Q8BRF7 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scfd1Q8BRF7 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scfd1Q8BRF7 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Scfd1Q8BRF7 Mir1668-201ENSMUST00000184114 107 ntBASIC19.97■□□□□ 0.79
Scfd1Q8BRF7 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.97■□□□□ 0.79
Scfd1Q8BRF7 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scfd1Q8BRF7 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scfd1Q8BRF7 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scfd1Q8BRF7 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Scfd1Q8BRF7 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scfd1Q8BRF7 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Scfd1Q8BRF7 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scfd1Q8BRF7 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scfd1Q8BRF7 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Scfd1Q8BRF7 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
Scfd1Q8BRF7 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
Scfd1Q8BRF7 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scfd1Q8BRF7 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Scfd1Q8BRF7 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scfd1Q8BRF7 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scfd1Q8BRF7 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Scfd1Q8BRF7 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Scfd1Q8BRF7 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scfd1Q8BRF7 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Scfd1Q8BRF7 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.96■□□□□ 0.79
Scfd1Q8BRF7 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scfd1Q8BRF7 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Scfd1Q8BRF7 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scfd1Q8BRF7 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scfd1Q8BRF7 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scfd1Q8BRF7 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scfd1Q8BRF7 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.95■□□□□ 0.78
Scfd1Q8BRF7 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scfd1Q8BRF7 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Scfd1Q8BRF7 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scfd1Q8BRF7 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC19.95■□□□□ 0.78
Scfd1Q8BRF7 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
Scfd1Q8BRF7 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC19.95■□□□□ 0.78
Scfd1Q8BRF7 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.95■□□□□ 0.78
Scfd1Q8BRF7 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Scfd1Q8BRF7 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scfd1Q8BRF7 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.95■□□□□ 0.78
Scfd1Q8BRF7 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scfd1Q8BRF7 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scfd1Q8BRF7 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scfd1Q8BRF7 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.94■□□□□ 0.78
Scfd1Q8BRF7 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scfd1Q8BRF7 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Scfd1Q8BRF7 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scfd1Q8BRF7 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scfd1Q8BRF7 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Scfd1Q8BRF7 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Scfd1Q8BRF7 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Scfd1Q8BRF7 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC19.94■□□□□ 0.78
Scfd1Q8BRF7 Gm6345-202ENSMUST00000180900 204 ntBASIC19.94■□□□□ 0.78
Scfd1Q8BRF7 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms