Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Usp1Q8BJQ2 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.55■□□□□ 0.56
Usp1Q8BJQ2 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp1Q8BJQ2 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp1Q8BJQ2 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.55■□□□□ 0.56
Usp1Q8BJQ2 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp1Q8BJQ2 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp1Q8BJQ2 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Usp1Q8BJQ2 AA414768-201ENSMUST00000121924 1257 ntBASIC18.55■□□□□ 0.56
Usp1Q8BJQ2 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.55■□□□□ 0.56
Usp1Q8BJQ2 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.55■□□□□ 0.56
Usp1Q8BJQ2 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp1Q8BJQ2 Gm18101-201ENSMUST00000215769 548 ntBASIC18.55■□□□□ 0.56
Usp1Q8BJQ2 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Usp1Q8BJQ2 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Usp1Q8BJQ2 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp1Q8BJQ2 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp1Q8BJQ2 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.54■□□□□ 0.56
Usp1Q8BJQ2 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.54■□□□□ 0.56
Usp1Q8BJQ2 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.54■□□□□ 0.56
Usp1Q8BJQ2 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Usp1Q8BJQ2 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Usp1Q8BJQ2 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Usp1Q8BJQ2 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.54■□□□□ 0.56
Usp1Q8BJQ2 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Usp1Q8BJQ2 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Usp1Q8BJQ2 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp1Q8BJQ2 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp1Q8BJQ2 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.53■□□□□ 0.56
Usp1Q8BJQ2 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp1Q8BJQ2 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp1Q8BJQ2 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp1Q8BJQ2 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp1Q8BJQ2 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.53■□□□□ 0.56
Usp1Q8BJQ2 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp1Q8BJQ2 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Usp1Q8BJQ2 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.53■□□□□ 0.56
Usp1Q8BJQ2 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp1Q8BJQ2 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
Usp1Q8BJQ2 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.53■□□□□ 0.56
Usp1Q8BJQ2 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp1Q8BJQ2 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Usp1Q8BJQ2 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp1Q8BJQ2 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp1Q8BJQ2 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Usp1Q8BJQ2 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.52■□□□□ 0.56
Usp1Q8BJQ2 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.52■□□□□ 0.56
Usp1Q8BJQ2 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Usp1Q8BJQ2 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Usp1Q8BJQ2 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Usp1Q8BJQ2 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Usp1Q8BJQ2 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Usp1Q8BJQ2 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Usp1Q8BJQ2 Gm16061-201ENSMUST00000122167 857 ntBASIC18.52■□□□□ 0.56
Usp1Q8BJQ2 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Usp1Q8BJQ2 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Usp1Q8BJQ2 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Usp1Q8BJQ2 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Usp1Q8BJQ2 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Usp1Q8BJQ2 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Usp1Q8BJQ2 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Usp1Q8BJQ2 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Usp1Q8BJQ2 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.55
Usp1Q8BJQ2 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Usp1Q8BJQ2 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Usp1Q8BJQ2 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Usp1Q8BJQ2 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Usp1Q8BJQ2 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Usp1Q8BJQ2 Tgds-204ENSMUST00000228543 1594 ntBASIC18.51■□□□□ 0.55
Usp1Q8BJQ2 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp1Q8BJQ2 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp1Q8BJQ2 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp1Q8BJQ2 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Usp1Q8BJQ2 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp1Q8BJQ2 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.51■□□□□ 0.55
Usp1Q8BJQ2 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp1Q8BJQ2 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Usp1Q8BJQ2 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Usp1Q8BJQ2 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.51■□□□□ 0.55
Usp1Q8BJQ2 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Usp1Q8BJQ2 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.51■□□□□ 0.55
Usp1Q8BJQ2 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp1Q8BJQ2 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp1Q8BJQ2 Gm10819-201ENSMUST00000099988 561 ntBASIC18.51■□□□□ 0.55
Usp1Q8BJQ2 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.51■□□□□ 0.55
Usp1Q8BJQ2 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp1Q8BJQ2 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.51■□□□□ 0.55
Usp1Q8BJQ2 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp1Q8BJQ2 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.51■□□□□ 0.55
Usp1Q8BJQ2 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp1Q8BJQ2 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp1Q8BJQ2 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Usp1Q8BJQ2 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp1Q8BJQ2 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp1Q8BJQ2 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Usp1Q8BJQ2 Gm24841-201ENSMUST00000158676 357 ntBASIC18.5■□□□□ 0.55
Usp1Q8BJQ2 Gm22697-201ENSMUST00000175194 63 ntBASIC18.5■□□□□ 0.55
Usp1Q8BJQ2 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.5■□□□□ 0.55
Usp1Q8BJQ2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp1Q8BJQ2 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms