Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.31■□□□□ 0.2
Scn3bQ8BHK2 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Scn3bQ8BHK2 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn3bQ8BHK2 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn3bQ8BHK2 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Scn3bQ8BHK2 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn3bQ8BHK2 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.3■□□□□ 0.2
Scn3bQ8BHK2 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Scn3bQ8BHK2 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn3bQ8BHK2 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Scn3bQ8BHK2 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.3■□□□□ 0.2
Scn3bQ8BHK2 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn3bQ8BHK2 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn3bQ8BHK2 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Scn3bQ8BHK2 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Scn3bQ8BHK2 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.3■□□□□ 0.2
Scn3bQ8BHK2 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn3bQ8BHK2 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn3bQ8BHK2 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn3bQ8BHK2 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn3bQ8BHK2 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
Scn3bQ8BHK2 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn3bQ8BHK2 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn3bQ8BHK2 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn3bQ8BHK2 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn3bQ8BHK2 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn3bQ8BHK2 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Scn3bQ8BHK2 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Scn3bQ8BHK2 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn3bQ8BHK2 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn3bQ8BHK2 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Scn3bQ8BHK2 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn3bQ8BHK2 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Scn3bQ8BHK2 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Scn3bQ8BHK2 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.29■□□□□ 0.2
Scn3bQ8BHK2 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn3bQ8BHK2 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn3bQ8BHK2 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Scn3bQ8BHK2 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn3bQ8BHK2 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Scn3bQ8BHK2 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Scn3bQ8BHK2 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn3bQ8BHK2 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn3bQ8BHK2 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Scn3bQ8BHK2 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Scn3bQ8BHK2 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn3bQ8BHK2 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn3bQ8BHK2 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn3bQ8BHK2 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn3bQ8BHK2 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn3bQ8BHK2 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Scn3bQ8BHK2 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Scn3bQ8BHK2 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn3bQ8BHK2 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.29■□□□□ 0.2
Scn3bQ8BHK2 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn3bQ8BHK2 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn3bQ8BHK2 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Scn3bQ8BHK2 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Scn3bQ8BHK2 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn3bQ8BHK2 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn3bQ8BHK2 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.28■□□□□ 0.2
Scn3bQ8BHK2 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn3bQ8BHK2 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Scn3bQ8BHK2 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Scn3bQ8BHK2 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.28■□□□□ 0.2
Scn3bQ8BHK2 Gm40848-201ENSMUST00000221998 324 ntBASIC16.28■□□□□ 0.2
Scn3bQ8BHK2 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn3bQ8BHK2 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Scn3bQ8BHK2 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.28■□□□□ 0.2
Scn3bQ8BHK2 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.28■□□□□ 0.2
Scn3bQ8BHK2 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Scn3bQ8BHK2 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn3bQ8BHK2 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn3bQ8BHK2 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.28■□□□□ 0.2
Scn3bQ8BHK2 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Scn3bQ8BHK2 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Scn3bQ8BHK2 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn3bQ8BHK2 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn3bQ8BHK2 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn3bQ8BHK2 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn3bQ8BHK2 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn3bQ8BHK2 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Scn3bQ8BHK2 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn3bQ8BHK2 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn3bQ8BHK2 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.27■□□□□ 0.2
Scn3bQ8BHK2 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.27■□□□□ 0.2
Scn3bQ8BHK2 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn3bQ8BHK2 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Scn3bQ8BHK2 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Scn3bQ8BHK2 Gm26833-201ENSMUST00000180899 440 ntBASIC16.27■□□□□ 0.2
Scn3bQ8BHK2 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Scn3bQ8BHK2 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Scn3bQ8BHK2 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Scn3bQ8BHK2 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Scn3bQ8BHK2 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Scn3bQ8BHK2 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Scn3bQ8BHK2 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Scn3bQ8BHK2 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Scn3bQ8BHK2 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn3bQ8BHK2 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms