Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sh3tc2Q80VA5 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.02■□□□□ 0.64
Sh3tc2Q80VA5 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.02■□□□□ 0.64
Sh3tc2Q80VA5 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.02■□□□□ 0.64
Sh3tc2Q80VA5 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Sh3tc2Q80VA5 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sh3tc2Q80VA5 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sh3tc2Q80VA5 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.02■□□□□ 0.64
Sh3tc2Q80VA5 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Sh3tc2Q80VA5 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Sh3tc2Q80VA5 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Sh3tc2Q80VA5 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Sh3tc2Q80VA5 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Sh3tc2Q80VA5 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sh3tc2Q80VA5 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sh3tc2Q80VA5 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
Sh3tc2Q80VA5 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sh3tc2Q80VA5 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Sh3tc2Q80VA5 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
Sh3tc2Q80VA5 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sh3tc2Q80VA5 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sh3tc2Q80VA5 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sh3tc2Q80VA5 Gm4217-201ENSMUST00000182243 1002 ntBASIC19.01■□□□□ 0.63
Sh3tc2Q80VA5 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC19.01■□□□□ 0.63
Sh3tc2Q80VA5 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.01■□□□□ 0.63
Sh3tc2Q80VA5 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Sh3tc2Q80VA5 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sh3tc2Q80VA5 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Sh3tc2Q80VA5 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sh3tc2Q80VA5 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sh3tc2Q80VA5 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Sh3tc2Q80VA5 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19■□□□□ 0.63
Sh3tc2Q80VA5 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Sh3tc2Q80VA5 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19■□□□□ 0.63
Sh3tc2Q80VA5 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3tc2Q80VA5 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19■□□□□ 0.63
Sh3tc2Q80VA5 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3tc2Q80VA5 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3tc2Q80VA5 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3tc2Q80VA5 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC19■□□□□ 0.63
Sh3tc2Q80VA5 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC19■□□□□ 0.63
Sh3tc2Q80VA5 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC19■□□□□ 0.63
Sh3tc2Q80VA5 Gm17661-201ENSMUST00000170317 270 ntBASIC19■□□□□ 0.63
Sh3tc2Q80VA5 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC19■□□□□ 0.63
Sh3tc2Q80VA5 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3tc2Q80VA5 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC19■□□□□ 0.63
Sh3tc2Q80VA5 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3tc2Q80VA5 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3tc2Q80VA5 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3tc2Q80VA5 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3tc2Q80VA5 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Sh3tc2Q80VA5 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sh3tc2Q80VA5 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sh3tc2Q80VA5 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Sh3tc2Q80VA5 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sh3tc2Q80VA5 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.99■□□□□ 0.63
Sh3tc2Q80VA5 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.99■□□□□ 0.63
Sh3tc2Q80VA5 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.99■□□□□ 0.63
Sh3tc2Q80VA5 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sh3tc2Q80VA5 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sh3tc2Q80VA5 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sh3tc2Q80VA5 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sh3tc2Q80VA5 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Sh3tc2Q80VA5 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Sh3tc2Q80VA5 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3tc2Q80VA5 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3tc2Q80VA5 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3tc2Q80VA5 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3tc2Q80VA5 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3tc2Q80VA5 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3tc2Q80VA5 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3tc2Q80VA5 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Sh3tc2Q80VA5 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3tc2Q80VA5 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3tc2Q80VA5 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3tc2Q80VA5 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3tc2Q80VA5 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3tc2Q80VA5 Gm25016-201ENSMUST00000158399 131 ntBASIC18.98■□□□□ 0.63
Sh3tc2Q80VA5 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3tc2Q80VA5 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Sh3tc2Q80VA5 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3tc2Q80VA5 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3tc2Q80VA5 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3tc2Q80VA5 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3tc2Q80VA5 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3tc2Q80VA5 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sh3tc2Q80VA5 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
Sh3tc2Q80VA5 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sh3tc2Q80VA5 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sh3tc2Q80VA5 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sh3tc2Q80VA5 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sh3tc2Q80VA5 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sh3tc2Q80VA5 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Sh3tc2Q80VA5 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Sh3tc2Q80VA5 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
Sh3tc2Q80VA5 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.97■□□□□ 0.63
Sh3tc2Q80VA5 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Sh3tc2Q80VA5 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sh3tc2Q80VA5 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sh3tc2Q80VA5 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms