Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh19Q80TF3 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Pcdh19Q80TF3 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh19Q80TF3 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh19Q80TF3 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh19Q80TF3 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Pcdh19Q80TF3 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh19Q80TF3 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh19Q80TF3 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh19Q80TF3 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh19Q80TF3 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh19Q80TF3 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh19Q80TF3 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh19Q80TF3 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.17■□□□□ 0.34
Pcdh19Q80TF3 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh19Q80TF3 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdh19Q80TF3 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Pcdh19Q80TF3 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh19Q80TF3 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.16■□□□□ 0.34
Pcdh19Q80TF3 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh19Q80TF3 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh19Q80TF3 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh19Q80TF3 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh19Q80TF3 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh19Q80TF3 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh19Q80TF3 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.16■□□□□ 0.34
Pcdh19Q80TF3 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.16■□□□□ 0.34
Pcdh19Q80TF3 Gm7889-201ENSMUST00000185591 958 ntBASIC17.16■□□□□ 0.34
Pcdh19Q80TF3 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh19Q80TF3 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh19Q80TF3 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh19Q80TF3 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh19Q80TF3 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh19Q80TF3 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh19Q80TF3 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.16■□□□□ 0.34
Pcdh19Q80TF3 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
Pcdh19Q80TF3 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh19Q80TF3 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh19Q80TF3 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh19Q80TF3 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdh19Q80TF3 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh19Q80TF3 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh19Q80TF3 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh19Q80TF3 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh19Q80TF3 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcdh19Q80TF3 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.15■□□□□ 0.34
Pcdh19Q80TF3 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.15■□□□□ 0.34
Pcdh19Q80TF3 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh19Q80TF3 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Pcdh19Q80TF3 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh19Q80TF3 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcdh19Q80TF3 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh19Q80TF3 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh19Q80TF3 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh19Q80TF3 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdh19Q80TF3 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Pcdh19Q80TF3 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh19Q80TF3 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh19Q80TF3 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh19Q80TF3 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh19Q80TF3 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh19Q80TF3 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh19Q80TF3 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh19Q80TF3 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh19Q80TF3 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.14■□□□□ 0.33
Pcdh19Q80TF3 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh19Q80TF3 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh19Q80TF3 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh19Q80TF3 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh19Q80TF3 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh19Q80TF3 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh19Q80TF3 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Pcdh19Q80TF3 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdh19Q80TF3 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh19Q80TF3 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh19Q80TF3 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Pcdh19Q80TF3 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh19Q80TF3 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh19Q80TF3 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh19Q80TF3 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh19Q80TF3 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh19Q80TF3 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh19Q80TF3 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdh19Q80TF3 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Pcdh19Q80TF3 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh19Q80TF3 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.13■□□□□ 0.33
Pcdh19Q80TF3 Gm24841-201ENSMUST00000158676 357 ntBASIC17.13■□□□□ 0.33
Pcdh19Q80TF3 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh19Q80TF3 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh19Q80TF3 Gm10231-201ENSMUST00000181584 441 ntBASIC17.13■□□□□ 0.33
Pcdh19Q80TF3 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdh19Q80TF3 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh19Q80TF3 Gm10175-202ENSMUST00000208752 441 ntBASIC17.13■□□□□ 0.33
Pcdh19Q80TF3 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdh19Q80TF3 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh19Q80TF3 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdh19Q80TF3 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh19Q80TF3 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Pcdh19Q80TF3 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdh19Q80TF3 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms