Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sox17Q61473 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox17Q61473 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox17Q61473 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox17Q61473 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Sox17Q61473 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox17Q61473 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox17Q61473 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox17Q61473 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.44■□□□□ 0.22
Sox17Q61473 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox17Q61473 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sox17Q61473 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox17Q61473 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox17Q61473 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox17Q61473 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox17Q61473 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sox17Q61473 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.43■□□□□ 0.22
Sox17Q61473 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox17Q61473 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.43■□□□□ 0.22
Sox17Q61473 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox17Q61473 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Sox17Q61473 Appbp2os-202ENSMUST00000206972 447 ntBASIC16.43■□□□□ 0.22
Sox17Q61473 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Sox17Q61473 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC16.43■□□□□ 0.22
Sox17Q61473 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox17Q61473 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.43■□□□□ 0.22
Sox17Q61473 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox17Q61473 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox17Q61473 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox17Q61473 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox17Q61473 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Sox17Q61473 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox17Q61473 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox17Q61473 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Sox17Q61473 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox17Q61473 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox17Q61473 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sox17Q61473 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.42■□□□□ 0.22
Sox17Q61473 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Sox17Q61473 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox17Q61473 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sox17Q61473 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Sox17Q61473 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Sox17Q61473 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox17Q61473 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox17Q61473 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox17Q61473 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox17Q61473 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sox17Q61473 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Sox17Q61473 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Sox17Q61473 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox17Q61473 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox17Q61473 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sox17Q61473 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Sox17Q61473 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox17Q61473 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Sox17Q61473 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Sox17Q61473 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox17Q61473 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox17Q61473 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox17Q61473 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Sox17Q61473 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.41■□□□□ 0.22
Sox17Q61473 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox17Q61473 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox17Q61473 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox17Q61473 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox17Q61473 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox17Q61473 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox17Q61473 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox17Q61473 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox17Q61473 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sox17Q61473 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sox17Q61473 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Sox17Q61473 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.4■□□□□ 0.22
Sox17Q61473 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Sox17Q61473 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox17Q61473 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox17Q61473 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox17Q61473 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.4■□□□□ 0.22
Sox17Q61473 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC16.4■□□□□ 0.22
Sox17Q61473 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.4■□□□□ 0.22
Sox17Q61473 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.4■□□□□ 0.22
Sox17Q61473 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.4■□□□□ 0.22
Sox17Q61473 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC16.4■□□□□ 0.22
Sox17Q61473 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox17Q61473 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Sox17Q61473 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox17Q61473 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.4■□□□□ 0.22
Sox17Q61473 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox17Q61473 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox17Q61473 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Sox17Q61473 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Sox17Q61473 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.4■□□□□ 0.22
Sox17Q61473 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox17Q61473 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sox17Q61473 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Sox17Q61473 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.39■□□□□ 0.22
Sox17Q61473 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.39■□□□□ 0.21
Sox17Q61473 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.39■□□□□ 0.21
Sox17Q61473 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms