Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav8d-1Q5R1H8 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8d-1Q5R1H8 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8d-1Q5R1H8 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8d-1Q5R1H8 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trav8d-1Q5R1H8 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trav8d-1Q5R1H8 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8d-1Q5R1H8 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC14.34□□□□□ -0.11
Trav8d-1Q5R1H8 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8d-1Q5R1H8 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8d-1Q5R1H8 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8d-1Q5R1H8 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8d-1Q5R1H8 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8d-1Q5R1H8 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8d-1Q5R1H8 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav8d-1Q5R1H8 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8d-1Q5R1H8 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8d-1Q5R1H8 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav8d-1Q5R1H8 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trav8d-1Q5R1H8 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav8d-1Q5R1H8 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav8d-1Q5R1H8 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trav8d-1Q5R1H8 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav8d-1Q5R1H8 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.33□□□□□ -0.12
Trav8d-1Q5R1H8 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav8d-1Q5R1H8 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trav8d-1Q5R1H8 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trav8d-1Q5R1H8 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.33□□□□□ -0.12
Trav8d-1Q5R1H8 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav8d-1Q5R1H8 Gm10849-201ENSMUST00000100397 618 ntBASIC14.33□□□□□ -0.12
Trav8d-1Q5R1H8 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Trav8d-1Q5R1H8 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC14.33□□□□□ -0.12
Trav8d-1Q5R1H8 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC14.33□□□□□ -0.12
Trav8d-1Q5R1H8 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trav8d-1Q5R1H8 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav8d-1Q5R1H8 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav8d-1Q5R1H8 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav8d-1Q5R1H8 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav8d-1Q5R1H8 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav8d-1Q5R1H8 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav8d-1Q5R1H8 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav8d-1Q5R1H8 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav8d-1Q5R1H8 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav8d-1Q5R1H8 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8d-1Q5R1H8 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8d-1Q5R1H8 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8d-1Q5R1H8 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8d-1Q5R1H8 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8d-1Q5R1H8 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trav8d-1Q5R1H8 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav8d-1Q5R1H8 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8d-1Q5R1H8 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8d-1Q5R1H8 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Trav8d-1Q5R1H8 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.32□□□□□ -0.12
Trav8d-1Q5R1H8 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8d-1Q5R1H8 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8d-1Q5R1H8 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trav8d-1Q5R1H8 Gm7514-201ENSMUST00000209475 934 ntBASIC14.32□□□□□ -0.12
Trav8d-1Q5R1H8 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8d-1Q5R1H8 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Trav8d-1Q5R1H8 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8d-1Q5R1H8 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.32□□□□□ -0.12
Trav8d-1Q5R1H8 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8d-1Q5R1H8 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8d-1Q5R1H8 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8d-1Q5R1H8 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav8d-1Q5R1H8 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav8d-1Q5R1H8 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8d-1Q5R1H8 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8d-1Q5R1H8 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trav8d-1Q5R1H8 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8d-1Q5R1H8 Tgds-204ENSMUST00000228543 1594 ntBASIC14.31□□□□□ -0.12
Trav8d-1Q5R1H8 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8d-1Q5R1H8 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8d-1Q5R1H8 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8d-1Q5R1H8 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8d-1Q5R1H8 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trav8d-1Q5R1H8 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8d-1Q5R1H8 Gm13146-201ENSMUST00000118508 780 ntBASIC14.31□□□□□ -0.12
Trav8d-1Q5R1H8 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trav8d-1Q5R1H8 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8d-1Q5R1H8 Gm27032-201ENSMUST00000183124 1116 ntBASIC14.31□□□□□ -0.12
Trav8d-1Q5R1H8 Gm7291-201ENSMUST00000199147 382 ntBASIC14.31□□□□□ -0.12
Trav8d-1Q5R1H8 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC14.31□□□□□ -0.12
Trav8d-1Q5R1H8 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav8d-1Q5R1H8 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC14.31□□□□□ -0.12
Trav8d-1Q5R1H8 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8d-1Q5R1H8 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trav8d-1Q5R1H8 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8d-1Q5R1H8 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8d-1Q5R1H8 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8d-1Q5R1H8 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
Trav8d-1Q5R1H8 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8d-1Q5R1H8 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trav8d-1Q5R1H8 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8d-1Q5R1H8 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8d-1Q5R1H8 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav8d-1Q5R1H8 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trav8d-1Q5R1H8 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav8d-1Q5R1H8 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms