Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim80Q3V061 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim80Q3V061 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Trim80Q3V061 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim80Q3V061 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim80Q3V061 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim80Q3V061 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim80Q3V061 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Trim80Q3V061 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim80Q3V061 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim80Q3V061 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.03■□□□□ 0.48
Trim80Q3V061 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.03■□□□□ 0.48
Trim80Q3V061 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim80Q3V061 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim80Q3V061 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim80Q3V061 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim80Q3V061 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim80Q3V061 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim80Q3V061 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim80Q3V061 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim80Q3V061 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim80Q3V061 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim80Q3V061 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Trim80Q3V061 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.02■□□□□ 0.48
Trim80Q3V061 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim80Q3V061 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.02■□□□□ 0.48
Trim80Q3V061 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim80Q3V061 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.02■□□□□ 0.48
Trim80Q3V061 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
Trim80Q3V061 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim80Q3V061 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.02■□□□□ 0.48
Trim80Q3V061 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.02■□□□□ 0.48
Trim80Q3V061 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Trim80Q3V061 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim80Q3V061 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC18.02■□□□□ 0.47
Trim80Q3V061 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim80Q3V061 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim80Q3V061 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim80Q3V061 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim80Q3V061 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim80Q3V061 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim80Q3V061 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim80Q3V061 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim80Q3V061 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim80Q3V061 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim80Q3V061 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim80Q3V061 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
Trim80Q3V061 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim80Q3V061 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Trim80Q3V061 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim80Q3V061 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim80Q3V061 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Trim80Q3V061 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim80Q3V061 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim80Q3V061 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Trim80Q3V061 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Trim80Q3V061 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim80Q3V061 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim80Q3V061 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim80Q3V061 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim80Q3V061 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim80Q3V061 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim80Q3V061 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim80Q3V061 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.01■□□□□ 0.47
Trim80Q3V061 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.01■□□□□ 0.47
Trim80Q3V061 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim80Q3V061 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.01■□□□□ 0.47
Trim80Q3V061 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trim80Q3V061 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim80Q3V061 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trim80Q3V061 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim80Q3V061 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trim80Q3V061 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18■□□□□ 0.47
Trim80Q3V061 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim80Q3V061 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18■□□□□ 0.47
Trim80Q3V061 Gm37805-201ENSMUST00000192612 1094 ntBASIC18■□□□□ 0.47
Trim80Q3V061 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim80Q3V061 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Trim80Q3V061 Gm10167-201ENSMUST00000150411 1479 ntBASIC18■□□□□ 0.47
Trim80Q3V061 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18■□□□□ 0.47
Trim80Q3V061 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim80Q3V061 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trim80Q3V061 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Trim80Q3V061 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim80Q3V061 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim80Q3V061 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim80Q3V061 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trim80Q3V061 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim80Q3V061 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim80Q3V061 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim80Q3V061 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim80Q3V061 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim80Q3V061 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
Trim80Q3V061 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim80Q3V061 Gm12527-201ENSMUST00000117967 564 ntBASIC17.99■□□□□ 0.47
Trim80Q3V061 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.99■□□□□ 0.47
Trim80Q3V061 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.99■□□□□ 0.47
Trim80Q3V061 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.99■□□□□ 0.47
Trim80Q3V061 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim80Q3V061 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms