Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Rnf44Q3UHJ8 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.3
Rnf44Q3UHJ8 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Rnf44Q3UHJ8 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf44Q3UHJ8 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf44Q3UHJ8 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.89■□□□□ 0.29
Rnf44Q3UHJ8 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf44Q3UHJ8 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf44Q3UHJ8 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf44Q3UHJ8 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf44Q3UHJ8 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf44Q3UHJ8 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf44Q3UHJ8 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf44Q3UHJ8 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf44Q3UHJ8 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Rnf44Q3UHJ8 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf44Q3UHJ8 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf44Q3UHJ8 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf44Q3UHJ8 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf44Q3UHJ8 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf44Q3UHJ8 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf44Q3UHJ8 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Rnf44Q3UHJ8 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Rnf44Q3UHJ8 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf44Q3UHJ8 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf44Q3UHJ8 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf44Q3UHJ8 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf44Q3UHJ8 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.88■□□□□ 0.29
Rnf44Q3UHJ8 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.88■□□□□ 0.29
Rnf44Q3UHJ8 Gm715-201ENSMUST00000117865 831 ntBASIC16.88■□□□□ 0.29
Rnf44Q3UHJ8 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf44Q3UHJ8 Mir8112-201ENSMUST00000184382 131 ntBASIC16.88■□□□□ 0.29
Rnf44Q3UHJ8 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.88■□□□□ 0.29
Rnf44Q3UHJ8 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.88■□□□□ 0.29
Rnf44Q3UHJ8 Gm10517-202ENSMUST00000192970 758 ntBASIC16.88■□□□□ 0.29
Rnf44Q3UHJ8 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf44Q3UHJ8 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Rnf44Q3UHJ8 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.88■□□□□ 0.29
Rnf44Q3UHJ8 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf44Q3UHJ8 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf44Q3UHJ8 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf44Q3UHJ8 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Rnf44Q3UHJ8 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf44Q3UHJ8 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf44Q3UHJ8 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf44Q3UHJ8 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf44Q3UHJ8 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf44Q3UHJ8 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf44Q3UHJ8 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Rnf44Q3UHJ8 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf44Q3UHJ8 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.87■□□□□ 0.29
Rnf44Q3UHJ8 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf44Q3UHJ8 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf44Q3UHJ8 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf44Q3UHJ8 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf44Q3UHJ8 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf44Q3UHJ8 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf44Q3UHJ8 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rnf44Q3UHJ8 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Rnf44Q3UHJ8 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf44Q3UHJ8 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf44Q3UHJ8 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf44Q3UHJ8 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf44Q3UHJ8 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf44Q3UHJ8 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.86■□□□□ 0.29
Rnf44Q3UHJ8 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf44Q3UHJ8 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf44Q3UHJ8 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf44Q3UHJ8 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Rnf44Q3UHJ8 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf44Q3UHJ8 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf44Q3UHJ8 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf44Q3UHJ8 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf44Q3UHJ8 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rnf44Q3UHJ8 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.85■□□□□ 0.29
Rnf44Q3UHJ8 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Rnf44Q3UHJ8 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf44Q3UHJ8 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf44Q3UHJ8 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
Rnf44Q3UHJ8 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf44Q3UHJ8 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf44Q3UHJ8 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf44Q3UHJ8 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.85■□□□□ 0.29
Rnf44Q3UHJ8 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf44Q3UHJ8 Gm4974-201ENSMUST00000209974 875 ntBASIC16.85■□□□□ 0.29
Rnf44Q3UHJ8 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.85■□□□□ 0.29
Rnf44Q3UHJ8 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.85■□□□□ 0.29
Rnf44Q3UHJ8 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf44Q3UHJ8 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
Rnf44Q3UHJ8 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf44Q3UHJ8 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf44Q3UHJ8 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf44Q3UHJ8 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf44Q3UHJ8 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Rnf44Q3UHJ8 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rnf44Q3UHJ8 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf44Q3UHJ8 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf44Q3UHJ8 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf44Q3UHJ8 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rnf44Q3UHJ8 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms