Protein–RNA interactions for Protein: Q3UGP9

Lrrc58, Leucine-rich repeat-containing protein 58, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc58Q3UGP9 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Lrrc58Q3UGP9 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lrrc58Q3UGP9 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lrrc58Q3UGP9 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lrrc58Q3UGP9 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.15■□□□□ 0.34
Lrrc58Q3UGP9 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lrrc58Q3UGP9 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrc58Q3UGP9 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.14■□□□□ 0.33
Lrrc58Q3UGP9 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrc58Q3UGP9 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrc58Q3UGP9 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrc58Q3UGP9 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrc58Q3UGP9 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Lrrc58Q3UGP9 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.14■□□□□ 0.33
Lrrc58Q3UGP9 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.14■□□□□ 0.33
Lrrc58Q3UGP9 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.14■□□□□ 0.33
Lrrc58Q3UGP9 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrc58Q3UGP9 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrc58Q3UGP9 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrc58Q3UGP9 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrc58Q3UGP9 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrc58Q3UGP9 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrc58Q3UGP9 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrc58Q3UGP9 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.14■□□□□ 0.33
Lrrc58Q3UGP9 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrc58Q3UGP9 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrc58Q3UGP9 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Lrrc58Q3UGP9 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Lrrc58Q3UGP9 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lrrc58Q3UGP9 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Lrrc58Q3UGP9 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lrrc58Q3UGP9 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Lrrc58Q3UGP9 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Lrrc58Q3UGP9 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Lrrc58Q3UGP9 Zfp783-201ENSMUST00000095946 670 ntBASIC17.13■□□□□ 0.33
Lrrc58Q3UGP9 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lrrc58Q3UGP9 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lrrc58Q3UGP9 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Lrrc58Q3UGP9 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.13■□□□□ 0.33
Lrrc58Q3UGP9 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lrrc58Q3UGP9 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrrc58Q3UGP9 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrrc58Q3UGP9 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrrc58Q3UGP9 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrrc58Q3UGP9 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrrc58Q3UGP9 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Lrrc58Q3UGP9 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lrrc58Q3UGP9 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.12■□□□□ 0.33
Lrrc58Q3UGP9 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.12■□□□□ 0.33
Lrrc58Q3UGP9 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.12■□□□□ 0.33
Lrrc58Q3UGP9 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lrrc58Q3UGP9 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lrrc58Q3UGP9 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lrrc58Q3UGP9 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Lrrc58Q3UGP9 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Lrrc58Q3UGP9 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.12■□□□□ 0.33
Lrrc58Q3UGP9 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Lrrc58Q3UGP9 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrrc58Q3UGP9 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrrc58Q3UGP9 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lrrc58Q3UGP9 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrrc58Q3UGP9 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lrrc58Q3UGP9 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Lrrc58Q3UGP9 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrrc58Q3UGP9 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrrc58Q3UGP9 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrrc58Q3UGP9 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrrc58Q3UGP9 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrrc58Q3UGP9 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.11■□□□□ 0.33
Lrrc58Q3UGP9 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lrrc58Q3UGP9 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Lrrc58Q3UGP9 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.11■□□□□ 0.33
Lrrc58Q3UGP9 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Lrrc58Q3UGP9 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lrrc58Q3UGP9 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.11■□□□□ 0.33
Lrrc58Q3UGP9 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Lrrc58Q3UGP9 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrrc58Q3UGP9 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrrc58Q3UGP9 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lrrc58Q3UGP9 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lrrc58Q3UGP9 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrrc58Q3UGP9 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrrc58Q3UGP9 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
Lrrc58Q3UGP9 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrrc58Q3UGP9 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrrc58Q3UGP9 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lrrc58Q3UGP9 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Lrrc58Q3UGP9 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Lrrc58Q3UGP9 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lrrc58Q3UGP9 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lrrc58Q3UGP9 Gm15378-201ENSMUST00000121894 207 ntBASIC17.1■□□□□ 0.33
Lrrc58Q3UGP9 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Lrrc58Q3UGP9 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lrrc58Q3UGP9 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.1■□□□□ 0.33
Lrrc58Q3UGP9 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.1■□□□□ 0.33
Lrrc58Q3UGP9 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lrrc58Q3UGP9 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lrrc58Q3UGP9 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lrrc58Q3UGP9 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lrrc58Q3UGP9 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms