Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cul4aQ3TCH7 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cul4aQ3TCH7 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Cul4aQ3TCH7 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cul4aQ3TCH7 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.38■□□□□ 0.53
Cul4aQ3TCH7 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cul4aQ3TCH7 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Cul4aQ3TCH7 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cul4aQ3TCH7 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.38■□□□□ 0.53
Cul4aQ3TCH7 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cul4aQ3TCH7 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cul4aQ3TCH7 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.37■□□□□ 0.53
Cul4aQ3TCH7 Mtag2-201ENSMUST00000058665 714 ntBASIC18.37■□□□□ 0.53
Cul4aQ3TCH7 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cul4aQ3TCH7 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Cul4aQ3TCH7 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cul4aQ3TCH7 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Cul4aQ3TCH7 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cul4aQ3TCH7 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cul4aQ3TCH7 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cul4aQ3TCH7 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cul4aQ3TCH7 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cul4aQ3TCH7 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Cul4aQ3TCH7 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Cul4aQ3TCH7 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cul4aQ3TCH7 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cul4aQ3TCH7 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cul4aQ3TCH7 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cul4aQ3TCH7 Mir5133-201ENSMUST00000174955 77 ntBASIC18.36■□□□□ 0.53
Cul4aQ3TCH7 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.36■□□□□ 0.53
Cul4aQ3TCH7 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.36■□□□□ 0.53
Cul4aQ3TCH7 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cul4aQ3TCH7 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cul4aQ3TCH7 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cul4aQ3TCH7 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cul4aQ3TCH7 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cul4aQ3TCH7 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cul4aQ3TCH7 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cul4aQ3TCH7 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cul4aQ3TCH7 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cul4aQ3TCH7 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cul4aQ3TCH7 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cul4aQ3TCH7 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Cul4aQ3TCH7 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cul4aQ3TCH7 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cul4aQ3TCH7 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cul4aQ3TCH7 Gm11643-201ENSMUST00000119578 864 ntBASIC18.35■□□□□ 0.53
Cul4aQ3TCH7 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.35■□□□□ 0.53
Cul4aQ3TCH7 Mir6349-201ENSMUST00000184059 97 ntBASIC18.35■□□□□ 0.53
Cul4aQ3TCH7 Gm8495-201ENSMUST00000188740 694 ntBASIC18.35■□□□□ 0.53
Cul4aQ3TCH7 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.35■□□□□ 0.53
Cul4aQ3TCH7 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cul4aQ3TCH7 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cul4aQ3TCH7 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cul4aQ3TCH7 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cul4aQ3TCH7 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cul4aQ3TCH7 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.35■□□□□ 0.53
Cul4aQ3TCH7 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cul4aQ3TCH7 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cul4aQ3TCH7 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cul4aQ3TCH7 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cul4aQ3TCH7 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cul4aQ3TCH7 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cul4aQ3TCH7 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cul4aQ3TCH7 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.34■□□□□ 0.53
Cul4aQ3TCH7 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cul4aQ3TCH7 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.34■□□□□ 0.53
Cul4aQ3TCH7 Gm27405-201ENSMUST00000184201 112 ntBASIC18.34■□□□□ 0.53
Cul4aQ3TCH7 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.34■□□□□ 0.53
Cul4aQ3TCH7 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cul4aQ3TCH7 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cul4aQ3TCH7 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cul4aQ3TCH7 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cul4aQ3TCH7 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cul4aQ3TCH7 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cul4aQ3TCH7 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cul4aQ3TCH7 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cul4aQ3TCH7 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cul4aQ3TCH7 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.33■□□□□ 0.52
Cul4aQ3TCH7 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.33■□□□□ 0.52
Cul4aQ3TCH7 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cul4aQ3TCH7 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cul4aQ3TCH7 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cul4aQ3TCH7 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Cul4aQ3TCH7 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cul4aQ3TCH7 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cul4aQ3TCH7 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cul4aQ3TCH7 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Cul4aQ3TCH7 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cul4aQ3TCH7 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cul4aQ3TCH7 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cul4aQ3TCH7 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cul4aQ3TCH7 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.32■□□□□ 0.52
Cul4aQ3TCH7 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cul4aQ3TCH7 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cul4aQ3TCH7 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cul4aQ3TCH7 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.32■□□□□ 0.52
Cul4aQ3TCH7 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.32■□□□□ 0.52
Cul4aQ3TCH7 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cul4aQ3TCH7 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms