Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Col10a1Q05306 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.11■□□□□ 0.17
Col10a1Q05306 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Col10a1Q05306 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col10a1Q05306 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col10a1Q05306 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Col10a1Q05306 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Col10a1Q05306 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Col10a1Q05306 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Col10a1Q05306 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col10a1Q05306 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col10a1Q05306 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col10a1Q05306 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col10a1Q05306 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col10a1Q05306 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col10a1Q05306 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.11■□□□□ 0.17
Col10a1Q05306 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col10a1Q05306 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Col10a1Q05306 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col10a1Q05306 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col10a1Q05306 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col10a1Q05306 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.11■□□□□ 0.17
Col10a1Q05306 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Col10a1Q05306 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Col10a1Q05306 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Col10a1Q05306 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col10a1Q05306 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
Col10a1Q05306 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.1■□□□□ 0.17
Col10a1Q05306 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col10a1Q05306 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col10a1Q05306 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Col10a1Q05306 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col10a1Q05306 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col10a1Q05306 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Col10a1Q05306 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Col10a1Q05306 Mir1199-201ENSMUST00000117015 119 ntBASIC16.1■□□□□ 0.17
Col10a1Q05306 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.1■□□□□ 0.17
Col10a1Q05306 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col10a1Q05306 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Col10a1Q05306 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Col10a1Q05306 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.09■□□□□ 0.17
Col10a1Q05306 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col10a1Q05306 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.09■□□□□ 0.17
Col10a1Q05306 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
Col10a1Q05306 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col10a1Q05306 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col10a1Q05306 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col10a1Q05306 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col10a1Q05306 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col10a1Q05306 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.09■□□□□ 0.17
Col10a1Q05306 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col10a1Q05306 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col10a1Q05306 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.09■□□□□ 0.17
Col10a1Q05306 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.09■□□□□ 0.17
Col10a1Q05306 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.09■□□□□ 0.17
Col10a1Q05306 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Col10a1Q05306 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Col10a1Q05306 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Col10a1Q05306 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col10a1Q05306 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col10a1Q05306 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col10a1Q05306 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Col10a1Q05306 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col10a1Q05306 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col10a1Q05306 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col10a1Q05306 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.08■□□□□ 0.16
Col10a1Q05306 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col10a1Q05306 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col10a1Q05306 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col10a1Q05306 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col10a1Q05306 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col10a1Q05306 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.08■□□□□ 0.16
Col10a1Q05306 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.08■□□□□ 0.16
Col10a1Q05306 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.08■□□□□ 0.16
Col10a1Q05306 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col10a1Q05306 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col10a1Q05306 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Col10a1Q05306 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col10a1Q05306 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col10a1Q05306 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.07■□□□□ 0.16
Col10a1Q05306 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col10a1Q05306 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
Col10a1Q05306 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Col10a1Q05306 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.07■□□□□ 0.16
Col10a1Q05306 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col10a1Q05306 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Col10a1Q05306 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.07■□□□□ 0.16
Col10a1Q05306 Gm10517-202ENSMUST00000192970 758 ntBASIC16.07■□□□□ 0.16
Col10a1Q05306 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Col10a1Q05306 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col10a1Q05306 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Col10a1Q05306 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col10a1Q05306 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col10a1Q05306 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.07■□□□□ 0.16
Col10a1Q05306 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col10a1Q05306 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Col10a1Q05306 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Col10a1Q05306 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col10a1Q05306 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col10a1Q05306 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms