Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cdh11P55288 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Cdh11P55288 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cdh11P55288 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdh11P55288 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.94■□□□□ 0.14
Cdh11P55288 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cdh11P55288 AC135637.1-201ENSMUST00000227750 365 ntBASIC15.94■□□□□ 0.14
Cdh11P55288 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdh11P55288 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Cdh11P55288 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdh11P55288 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.94■□□□□ 0.14
Cdh11P55288 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdh11P55288 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdh11P55288 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdh11P55288 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdh11P55288 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdh11P55288 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdh11P55288 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdh11P55288 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cdh11P55288 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdh11P55288 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cdh11P55288 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdh11P55288 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdh11P55288 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cdh11P55288 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC15.93■□□□□ 0.14
Cdh11P55288 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cdh11P55288 Gm8520-201ENSMUST00000186517 868 ntBASIC15.93■□□□□ 0.14
Cdh11P55288 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdh11P55288 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Cdh11P55288 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cdh11P55288 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Cdh11P55288 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Cdh11P55288 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdh11P55288 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cdh11P55288 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdh11P55288 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Cdh11P55288 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdh11P55288 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.93■□□□□ 0.14
Cdh11P55288 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdh11P55288 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC15.93■□□□□ 0.14
Cdh11P55288 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.93■□□□□ 0.14
Cdh11P55288 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cdh11P55288 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cdh11P55288 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Cdh11P55288 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh11P55288 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh11P55288 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
Cdh11P55288 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC15.92■□□□□ 0.14
Cdh11P55288 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh11P55288 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh11P55288 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Cdh11P55288 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh11P55288 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.92■□□□□ 0.14
Cdh11P55288 Gm8309-201ENSMUST00000206627 1448 ntBASIC15.92■□□□□ 0.14
Cdh11P55288 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh11P55288 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh11P55288 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.91■□□□□ 0.14
Cdh11P55288 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh11P55288 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh11P55288 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.91■□□□□ 0.14
Cdh11P55288 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh11P55288 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh11P55288 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.91■□□□□ 0.14
Cdh11P55288 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC15.91■□□□□ 0.14
Cdh11P55288 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh11P55288 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC15.91■□□□□ 0.14
Cdh11P55288 Gm22240-201ENSMUST00000175225 82 ntBASIC15.91■□□□□ 0.14
Cdh11P55288 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC15.91■□□□□ 0.14
Cdh11P55288 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC15.91■□□□□ 0.14
Cdh11P55288 Trmt13-210ENSMUST00000198454 880 ntBASIC15.91■□□□□ 0.14
Cdh11P55288 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Cdh11P55288 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh11P55288 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Cdh11P55288 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh11P55288 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh11P55288 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Cdh11P55288 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Cdh11P55288 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh11P55288 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Cdh11P55288 Gm43672-201ENSMUST00000199072 1731 ntBASIC15.91■□□□□ 0.14
Cdh11P55288 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh11P55288 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh11P55288 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Cdh11P55288 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Cdh11P55288 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh11P55288 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Cdh11P55288 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh11P55288 Gm37856-201ENSMUST00000191634 999 ntBASIC15.9■□□□□ 0.14
Cdh11P55288 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh11P55288 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh11P55288 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh11P55288 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Cdh11P55288 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC15.9■□□□□ 0.14
Cdh11P55288 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh11P55288 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Cdh11P55288 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh11P55288 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh11P55288 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh11P55288 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh11P55288 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms