Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Rph3aP47708 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Rph3aP47708 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.82■□□□□ 0.28
Rph3aP47708 Gm13168-201ENSMUST00000121771 632 ntBASIC16.82■□□□□ 0.28
Rph3aP47708 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.82■□□□□ 0.28
Rph3aP47708 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.82■□□□□ 0.28
Rph3aP47708 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rph3aP47708 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rph3aP47708 Gm8520-201ENSMUST00000186517 868 ntBASIC16.82■□□□□ 0.28
Rph3aP47708 Gm8969-201ENSMUST00000199694 526 ntBASIC16.82■□□□□ 0.28
Rph3aP47708 Gm18025-201ENSMUST00000221733 862 ntBASIC16.82■□□□□ 0.28
Rph3aP47708 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.82■□□□□ 0.28
Rph3aP47708 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rph3aP47708 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rph3aP47708 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rph3aP47708 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.82■□□□□ 0.28
Rph3aP47708 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rph3aP47708 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.82■□□□□ 0.28
Rph3aP47708 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rph3aP47708 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rph3aP47708 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rph3aP47708 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rph3aP47708 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rph3aP47708 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rph3aP47708 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rph3aP47708 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rph3aP47708 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rph3aP47708 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rph3aP47708 Gm15378-201ENSMUST00000121894 207 ntBASIC16.81■□□□□ 0.28
Rph3aP47708 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rph3aP47708 Gm27011-201ENSMUST00000182352 972 ntBASIC16.81■□□□□ 0.28
Rph3aP47708 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.81■□□□□ 0.28
Rph3aP47708 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rph3aP47708 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rph3aP47708 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rph3aP47708 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rph3aP47708 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rph3aP47708 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rph3aP47708 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rph3aP47708 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rph3aP47708 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rph3aP47708 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rph3aP47708 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rph3aP47708 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.8■□□□□ 0.28
Rph3aP47708 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rph3aP47708 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rph3aP47708 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rph3aP47708 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rph3aP47708 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rph3aP47708 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rph3aP47708 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rph3aP47708 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rph3aP47708 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rph3aP47708 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rph3aP47708 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rph3aP47708 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rph3aP47708 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rph3aP47708 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rph3aP47708 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rph3aP47708 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rph3aP47708 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rph3aP47708 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Rph3aP47708 Gm42545-201ENSMUST00000202755 922 ntBASIC16.79■□□□□ 0.28
Rph3aP47708 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.79■□□□□ 0.28
Rph3aP47708 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rph3aP47708 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rph3aP47708 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rph3aP47708 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rph3aP47708 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.79■□□□□ 0.28
Rph3aP47708 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rph3aP47708 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rph3aP47708 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rph3aP47708 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.79■□□□□ 0.28
Rph3aP47708 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.79■□□□□ 0.28
Rph3aP47708 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rph3aP47708 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rph3aP47708 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rph3aP47708 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rph3aP47708 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.79■□□□□ 0.28
Rph3aP47708 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rph3aP47708 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rph3aP47708 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rph3aP47708 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rph3aP47708 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rph3aP47708 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rph3aP47708 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rph3aP47708 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.78■□□□□ 0.28
Rph3aP47708 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.78■□□□□ 0.28
Rph3aP47708 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rph3aP47708 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rph3aP47708 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rph3aP47708 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.78■□□□□ 0.28
Rph3aP47708 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rph3aP47708 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rph3aP47708 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rph3aP47708 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rph3aP47708 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Rph3aP47708 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.77■□□□□ 0.28
Rph3aP47708 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rph3aP47708 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms