Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Abca1P41233 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Abca1P41233 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Abca1P41233 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Abca1P41233 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Abca1P41233 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Abca1P41233 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.48□□□□□ -0.09
Abca1P41233 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Abca1P41233 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Abca1P41233 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Abca1P41233 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Abca1P41233 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Abca1P41233 Gm9885-202ENSMUST00000186234 2209 ntBASIC14.47□□□□□ -0.09
Abca1P41233 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Abca1P41233 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Abca1P41233 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Abca1P41233 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Abca1P41233 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.47□□□□□ -0.09
Abca1P41233 Gm27463-201ENSMUST00000183569 57 ntBASIC14.47□□□□□ -0.09
Abca1P41233 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.47□□□□□ -0.09
Abca1P41233 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Abca1P41233 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Abca1P41233 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Abca1P41233 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Abca1P41233 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Abca1P41233 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Abca1P41233 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Abca1P41233 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Abca1P41233 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Abca1P41233 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Abca1P41233 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Abca1P41233 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Abca1P41233 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Abca1P41233 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Abca1P41233 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Abca1P41233 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Abca1P41233 Gm9103-201ENSMUST00000119371 405 ntBASIC14.46□□□□□ -0.09
Abca1P41233 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.46□□□□□ -0.09
Abca1P41233 Gm18101-201ENSMUST00000215769 548 ntBASIC14.46□□□□□ -0.09
Abca1P41233 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Abca1P41233 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Abca1P41233 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Abca1P41233 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Abca1P41233 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Abca1P41233 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
Abca1P41233 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Abca1P41233 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Abca1P41233 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Abca1P41233 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Abca1P41233 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Abca1P41233 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Abca1P41233 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Abca1P41233 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.46□□□□□ -0.09
Abca1P41233 Gm25016-201ENSMUST00000158399 131 ntBASIC14.46□□□□□ -0.09
Abca1P41233 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Abca1P41233 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Abca1P41233 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Abca1P41233 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Abca1P41233 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Abca1P41233 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.46□□□□□ -0.1
Abca1P41233 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Abca1P41233 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Abca1P41233 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Abca1P41233 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Abca1P41233 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Abca1P41233 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Abca1P41233 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14.45□□□□□ -0.1
Abca1P41233 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Abca1P41233 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC14.45□□□□□ -0.1
Abca1P41233 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Abca1P41233 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Abca1P41233 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Abca1P41233 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Abca1P41233 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Abca1P41233 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Abca1P41233 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Abca1P41233 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Abca1P41233 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Abca1P41233 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Abca1P41233 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Abca1P41233 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Abca1P41233 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Abca1P41233 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Abca1P41233 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Abca1P41233 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Abca1P41233 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Abca1P41233 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Abca1P41233 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Abca1P41233 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Abca1P41233 Gm2274-201ENSMUST00000184539 609 ntBASIC14.44□□□□□ -0.1
Abca1P41233 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Abca1P41233 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Abca1P41233 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Abca1P41233 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Abca1P41233 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Abca1P41233 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Abca1P41233 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Abca1P41233 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Abca1P41233 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Abca1P41233 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms