Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sox6P40645 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.44■□□□□ 0.22
Sox6P40645 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Sox6P40645 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Sox6P40645 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.44■□□□□ 0.22
Sox6P40645 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sox6P40645 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox6P40645 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox6P40645 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.43■□□□□ 0.22
Sox6P40645 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Sox6P40645 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox6P40645 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sox6P40645 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sox6P40645 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Sox6P40645 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.43■□□□□ 0.22
Sox6P40645 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sox6P40645 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Sox6P40645 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Sox6P40645 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Sox6P40645 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox6P40645 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Sox6P40645 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.43■□□□□ 0.22
Sox6P40645 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sox6P40645 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.43■□□□□ 0.22
Sox6P40645 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox6P40645 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.43■□□□□ 0.22
Sox6P40645 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sox6P40645 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox6P40645 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sox6P40645 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox6P40645 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sox6P40645 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox6P40645 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox6P40645 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox6P40645 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox6P40645 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sox6P40645 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.42■□□□□ 0.22
Sox6P40645 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.42■□□□□ 0.22
Sox6P40645 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sox6P40645 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Sox6P40645 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sox6P40645 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox6P40645 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.42■□□□□ 0.22
Sox6P40645 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox6P40645 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox6P40645 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox6P40645 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sox6P40645 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Sox6P40645 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.42■□□□□ 0.22
Sox6P40645 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sox6P40645 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox6P40645 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox6P40645 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox6P40645 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox6P40645 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.41■□□□□ 0.22
Sox6P40645 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox6P40645 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.41■□□□□ 0.22
Sox6P40645 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox6P40645 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sox6P40645 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox6P40645 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Sox6P40645 Gm13148-201ENSMUST00000118892 745 ntBASIC16.41■□□□□ 0.22
Sox6P40645 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox6P40645 Gm5408-201ENSMUST00000197998 747 ntBASIC16.41■□□□□ 0.22
Sox6P40645 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Sox6P40645 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox6P40645 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.41■□□□□ 0.22
Sox6P40645 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox6P40645 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox6P40645 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox6P40645 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox6P40645 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Sox6P40645 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.41■□□□□ 0.22
Sox6P40645 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Sox6P40645 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox6P40645 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox6P40645 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox6P40645 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sox6P40645 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Sox6P40645 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox6P40645 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.4■□□□□ 0.22
Sox6P40645 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox6P40645 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox6P40645 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox6P40645 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox6P40645 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox6P40645 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sox6P40645 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Sox6P40645 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sox6P40645 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sox6P40645 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sox6P40645 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sox6P40645 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sox6P40645 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sox6P40645 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sox6P40645 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sox6P40645 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sox6P40645 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.39■□□□□ 0.21
Sox6P40645 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Sox6P40645 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms