Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Cdh4P39038 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdh4P39038 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdh4P39038 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Cdh4P39038 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdh4P39038 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdh4P39038 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdh4P39038 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdh4P39038 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cdh4P39038 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdh4P39038 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdh4P39038 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.71■□□□□ 0.27
Cdh4P39038 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdh4P39038 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdh4P39038 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.71■□□□□ 0.27
Cdh4P39038 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cdh4P39038 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdh4P39038 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.71■□□□□ 0.27
Cdh4P39038 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.71■□□□□ 0.27
Cdh4P39038 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.71■□□□□ 0.27
Cdh4P39038 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdh4P39038 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.71■□□□□ 0.27
Cdh4P39038 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdh4P39038 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Cdh4P39038 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Cdh4P39038 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.71■□□□□ 0.27
Cdh4P39038 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cdh4P39038 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Cdh4P39038 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Cdh4P39038 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Cdh4P39038 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.7■□□□□ 0.26
Cdh4P39038 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cdh4P39038 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cdh4P39038 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdh4P39038 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdh4P39038 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cdh4P39038 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdh4P39038 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdh4P39038 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdh4P39038 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdh4P39038 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cdh4P39038 Gm715-201ENSMUST00000117865 831 ntBASIC16.7■□□□□ 0.26
Cdh4P39038 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cdh4P39038 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdh4P39038 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdh4P39038 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.7■□□□□ 0.26
Cdh4P39038 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cdh4P39038 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cdh4P39038 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.69■□□□□ 0.26
Cdh4P39038 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.69■□□□□ 0.26
Cdh4P39038 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdh4P39038 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.69■□□□□ 0.26
Cdh4P39038 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cdh4P39038 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.69■□□□□ 0.26
Cdh4P39038 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Cdh4P39038 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdh4P39038 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdh4P39038 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Cdh4P39038 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdh4P39038 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdh4P39038 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdh4P39038 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdh4P39038 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdh4P39038 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.69■□□□□ 0.26
Cdh4P39038 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cdh4P39038 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdh4P39038 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdh4P39038 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdh4P39038 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cdh4P39038 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdh4P39038 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdh4P39038 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdh4P39038 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Cdh4P39038 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdh4P39038 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cdh4P39038 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cdh4P39038 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdh4P39038 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdh4P39038 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cdh4P39038 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Cdh4P39038 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cdh4P39038 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cdh4P39038 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdh4P39038 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdh4P39038 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdh4P39038 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Cdh4P39038 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdh4P39038 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdh4P39038 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.67■□□□□ 0.26
Cdh4P39038 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.67■□□□□ 0.26
Cdh4P39038 Gm10517-202ENSMUST00000192970 758 ntBASIC16.67■□□□□ 0.26
Cdh4P39038 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdh4P39038 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdh4P39038 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdh4P39038 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdh4P39038 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Cdh4P39038 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdh4P39038 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cdh4P39038 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cdh4P39038 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms