Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ldb2O55203 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ldb2O55203 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ldb2O55203 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ldb2O55203 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ldb2O55203 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ldb2O55203 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.39■□□□□ 0.37
Ldb2O55203 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ldb2O55203 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ldb2O55203 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ldb2O55203 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ldb2O55203 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ldb2O55203 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ldb2O55203 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Ldb2O55203 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ldb2O55203 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ldb2O55203 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.38■□□□□ 0.37
Ldb2O55203 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Ldb2O55203 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ldb2O55203 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.38■□□□□ 0.37
Ldb2O55203 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ldb2O55203 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ldb2O55203 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ldb2O55203 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ldb2O55203 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Ldb2O55203 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Ldb2O55203 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ldb2O55203 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ldb2O55203 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ldb2O55203 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ldb2O55203 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ldb2O55203 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ldb2O55203 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ldb2O55203 Gm4974-201ENSMUST00000209974 875 ntBASIC17.37■□□□□ 0.37
Ldb2O55203 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ldb2O55203 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Ldb2O55203 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Ldb2O55203 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ldb2O55203 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.37■□□□□ 0.37
Ldb2O55203 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ldb2O55203 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ldb2O55203 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Ldb2O55203 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ldb2O55203 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ldb2O55203 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ldb2O55203 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Ldb2O55203 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ldb2O55203 Gm10517-202ENSMUST00000192970 758 ntBASIC17.36■□□□□ 0.37
Ldb2O55203 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ldb2O55203 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ldb2O55203 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ldb2O55203 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ldb2O55203 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ldb2O55203 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Ldb2O55203 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ldb2O55203 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.36■□□□□ 0.37
Ldb2O55203 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ldb2O55203 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ldb2O55203 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ldb2O55203 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ldb2O55203 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.35■□□□□ 0.37
Ldb2O55203 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ldb2O55203 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.35■□□□□ 0.37
Ldb2O55203 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Ldb2O55203 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.35■□□□□ 0.37
Ldb2O55203 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ldb2O55203 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ldb2O55203 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ldb2O55203 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ldb2O55203 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ldb2O55203 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ldb2O55203 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ldb2O55203 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ldb2O55203 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ldb2O55203 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Ldb2O55203 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Ldb2O55203 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.34■□□□□ 0.37
Ldb2O55203 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ldb2O55203 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ldb2O55203 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.34■□□□□ 0.37
Ldb2O55203 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ldb2O55203 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ldb2O55203 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ldb2O55203 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.34■□□□□ 0.37
Ldb2O55203 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ldb2O55203 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.34■□□□□ 0.37
Ldb2O55203 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ldb2O55203 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.34■□□□□ 0.37
Ldb2O55203 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.34■□□□□ 0.37
Ldb2O55203 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ldb2O55203 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ldb2O55203 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ldb2O55203 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ldb2O55203 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ldb2O55203 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ldb2O55203 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Ldb2O55203 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ldb2O55203 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ldb2O55203 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Ldb2O55203 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms