Protein–RNA interactions for Protein: O54962

Banf1, Barrier-to-autointegration factor, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Banf1O54962 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Banf1O54962 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Banf1O54962 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Banf1O54962 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Banf1O54962 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Banf1O54962 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.79■□□□□ 0.44
Banf1O54962 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Banf1O54962 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Banf1O54962 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Banf1O54962 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Banf1O54962 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Banf1O54962 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Banf1O54962 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.79■□□□□ 0.44
Banf1O54962 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Banf1O54962 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.79■□□□□ 0.44
Banf1O54962 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Banf1O54962 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Banf1O54962 Mtag2-201ENSMUST00000058665 714 ntBASIC17.79■□□□□ 0.44
Banf1O54962 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Banf1O54962 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Banf1O54962 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Banf1O54962 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Banf1O54962 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Banf1O54962 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Banf1O54962 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Banf1O54962 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Banf1O54962 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Banf1O54962 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Banf1O54962 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Banf1O54962 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Banf1O54962 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Banf1O54962 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Banf1O54962 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.78■□□□□ 0.44
Banf1O54962 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.78■□□□□ 0.44
Banf1O54962 Mir8112-201ENSMUST00000184382 131 ntBASIC17.78■□□□□ 0.44
Banf1O54962 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.78■□□□□ 0.44
Banf1O54962 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Banf1O54962 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Banf1O54962 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.78■□□□□ 0.44
Banf1O54962 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Banf1O54962 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Banf1O54962 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Banf1O54962 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Banf1O54962 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Banf1O54962 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Banf1O54962 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Banf1O54962 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Banf1O54962 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Banf1O54962 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Banf1O54962 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Banf1O54962 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Banf1O54962 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Banf1O54962 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Banf1O54962 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.77■□□□□ 0.44
Banf1O54962 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Banf1O54962 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Banf1O54962 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Banf1O54962 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.77■□□□□ 0.43
Banf1O54962 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Banf1O54962 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Banf1O54962 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Banf1O54962 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Banf1O54962 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Banf1O54962 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Banf1O54962 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Banf1O54962 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Banf1O54962 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Banf1O54962 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Banf1O54962 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Banf1O54962 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Banf1O54962 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Banf1O54962 Gm13401-201ENSMUST00000117074 291 ntBASIC17.76■□□□□ 0.43
Banf1O54962 Mir2861-201ENSMUST00000175539 82 ntBASIC17.76■□□□□ 0.43
Banf1O54962 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Banf1O54962 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Banf1O54962 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Banf1O54962 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Banf1O54962 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Banf1O54962 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Banf1O54962 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Banf1O54962 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Banf1O54962 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.76■□□□□ 0.43
Banf1O54962 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Banf1O54962 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Banf1O54962 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Banf1O54962 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Banf1O54962 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
Banf1O54962 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Banf1O54962 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Banf1O54962 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Banf1O54962 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Banf1O54962 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Banf1O54962 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Banf1O54962 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Banf1O54962 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Banf1O54962 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Banf1O54962 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
Banf1O54962 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Banf1O54962 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Banf1O54962 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms