Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Matn3O35701 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Matn3O35701 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Matn3O35701 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Matn3O35701 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Matn3O35701 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.9■□□□□ 0.14
Matn3O35701 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Matn3O35701 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Matn3O35701 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Matn3O35701 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Matn3O35701 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Matn3O35701 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Matn3O35701 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Matn3O35701 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Matn3O35701 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Matn3O35701 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.89■□□□□ 0.13
Matn3O35701 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Matn3O35701 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Matn3O35701 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Matn3O35701 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Matn3O35701 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Matn3O35701 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Matn3O35701 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Matn3O35701 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Matn3O35701 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Matn3O35701 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Matn3O35701 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC15.89■□□□□ 0.13
Matn3O35701 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Matn3O35701 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC15.89■□□□□ 0.13
Matn3O35701 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.89■□□□□ 0.13
Matn3O35701 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Matn3O35701 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Matn3O35701 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Matn3O35701 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Matn3O35701 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Matn3O35701 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.89■□□□□ 0.13
Matn3O35701 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Matn3O35701 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Matn3O35701 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Matn3O35701 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Matn3O35701 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Matn3O35701 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Matn3O35701 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Matn3O35701 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Matn3O35701 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Matn3O35701 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Matn3O35701 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Matn3O35701 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.88■□□□□ 0.13
Matn3O35701 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Matn3O35701 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Matn3O35701 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Matn3O35701 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Matn3O35701 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Matn3O35701 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Matn3O35701 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Matn3O35701 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Matn3O35701 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Matn3O35701 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Matn3O35701 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Matn3O35701 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Matn3O35701 Gm11421-201ENSMUST00000122124 294 ntBASIC15.87■□□□□ 0.13
Matn3O35701 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Matn3O35701 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Matn3O35701 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Matn3O35701 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Matn3O35701 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Matn3O35701 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Matn3O35701 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Matn3O35701 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
Matn3O35701 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Matn3O35701 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Matn3O35701 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Matn3O35701 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Matn3O35701 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Matn3O35701 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Matn3O35701 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Matn3O35701 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Matn3O35701 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC15.86■□□□□ 0.13
Matn3O35701 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Matn3O35701 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC15.86■□□□□ 0.13
Matn3O35701 Gm38205-201ENSMUST00000192243 258 ntBASIC15.86■□□□□ 0.13
Matn3O35701 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Matn3O35701 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Matn3O35701 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Matn3O35701 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Matn3O35701 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Matn3O35701 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Matn3O35701 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Matn3O35701 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Matn3O35701 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Matn3O35701 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Matn3O35701 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Matn3O35701 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Matn3O35701 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
Matn3O35701 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Matn3O35701 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Matn3O35701 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Matn3O35701 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Matn3O35701 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Matn3O35701 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms