Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Efnb3O35393 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC13.83□□□□□ -0.2
Efnb3O35393 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC13.83□□□□□ -0.2
Efnb3O35393 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Efnb3O35393 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Efnb3O35393 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Efnb3O35393 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.83□□□□□ -0.2
Efnb3O35393 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Efnb3O35393 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Efnb3O35393 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Efnb3O35393 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Efnb3O35393 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Efnb3O35393 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Efnb3O35393 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Efnb3O35393 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Efnb3O35393 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Efnb3O35393 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Efnb3O35393 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Efnb3O35393 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Efnb3O35393 Gm13234-201ENSMUST00000120010 747 ntBASIC13.82□□□□□ -0.2
Efnb3O35393 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Efnb3O35393 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC13.82□□□□□ -0.2
Efnb3O35393 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Efnb3O35393 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Efnb3O35393 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Efnb3O35393 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Efnb3O35393 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Efnb3O35393 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Efnb3O35393 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Efnb3O35393 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Efnb3O35393 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Efnb3O35393 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Efnb3O35393 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Efnb3O35393 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Efnb3O35393 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Efnb3O35393 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Efnb3O35393 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Efnb3O35393 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Efnb3O35393 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Efnb3O35393 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Efnb3O35393 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Efnb3O35393 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Efnb3O35393 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Efnb3O35393 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Efnb3O35393 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Efnb3O35393 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Efnb3O35393 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC13.81□□□□□ -0.2
Efnb3O35393 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Efnb3O35393 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Efnb3O35393 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Efnb3O35393 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Efnb3O35393 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Efnb3O35393 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Efnb3O35393 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Efnb3O35393 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Efnb3O35393 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Efnb3O35393 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Efnb3O35393 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Efnb3O35393 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Efnb3O35393 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Efnb3O35393 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Efnb3O35393 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Efnb3O35393 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Efnb3O35393 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC13.8□□□□□ -0.2
Efnb3O35393 Gm42642-201ENSMUST00000200683 355 ntBASIC13.8□□□□□ -0.2
Efnb3O35393 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC13.8□□□□□ -0.2
Efnb3O35393 Gm18671-201ENSMUST00000214826 683 ntBASIC13.8□□□□□ -0.2
Efnb3O35393 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC13.8□□□□□ -0.2
Efnb3O35393 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Efnb3O35393 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Efnb3O35393 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Efnb3O35393 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Efnb3O35393 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Efnb3O35393 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Efnb3O35393 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.8□□□□□ -0.2
Efnb3O35393 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Efnb3O35393 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Efnb3O35393 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Efnb3O35393 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Efnb3O35393 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Efnb3O35393 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.79□□□□□ -0.2
Efnb3O35393 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Efnb3O35393 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Efnb3O35393 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Efnb3O35393 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Efnb3O35393 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Efnb3O35393 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Efnb3O35393 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC13.79□□□□□ -0.2
Efnb3O35393 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.79□□□□□ -0.2
Efnb3O35393 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Efnb3O35393 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Efnb3O35393 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC13.79□□□□□ -0.2
Efnb3O35393 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Efnb3O35393 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Efnb3O35393 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Efnb3O35393 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Efnb3O35393 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Efnb3O35393 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Efnb3O35393 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Efnb3O35393 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms