Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Capn1O35350 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Capn1O35350 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Capn1O35350 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Capn1O35350 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Capn1O35350 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Capn1O35350 Gm11643-201ENSMUST00000119578 864 ntBASIC16.18■□□□□ 0.18
Capn1O35350 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Capn1O35350 Gm37292-201ENSMUST00000192062 758 ntBASIC16.18■□□□□ 0.18
Capn1O35350 Gm21814-202ENSMUST00000203277 873 ntBASIC16.18■□□□□ 0.18
Capn1O35350 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.18■□□□□ 0.18
Capn1O35350 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Capn1O35350 Gm5417-201ENSMUST00000079706 384 ntBASIC16.18■□□□□ 0.18
Capn1O35350 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Capn1O35350 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Capn1O35350 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Capn1O35350 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Capn1O35350 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.18■□□□□ 0.18
Capn1O35350 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.18■□□□□ 0.18
Capn1O35350 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Capn1O35350 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Capn1O35350 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Capn1O35350 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.17■□□□□ 0.18
Capn1O35350 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Capn1O35350 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Capn1O35350 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Capn1O35350 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.17■□□□□ 0.18
Capn1O35350 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
Capn1O35350 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Capn1O35350 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Capn1O35350 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.17■□□□□ 0.18
Capn1O35350 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Capn1O35350 Gm9987-201ENSMUST00000069768 567 ntBASIC16.17■□□□□ 0.18
Capn1O35350 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Capn1O35350 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.17■□□□□ 0.18
Capn1O35350 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Capn1O35350 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.17■□□□□ 0.18
Capn1O35350 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Capn1O35350 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Capn1O35350 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Capn1O35350 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Capn1O35350 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Capn1O35350 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Capn1O35350 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Capn1O35350 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Capn1O35350 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Capn1O35350 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Capn1O35350 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Capn1O35350 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Capn1O35350 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Capn1O35350 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Capn1O35350 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Capn1O35350 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Capn1O35350 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.16■□□□□ 0.18
Capn1O35350 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.16■□□□□ 0.18
Capn1O35350 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Capn1O35350 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Capn1O35350 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Capn1O35350 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Capn1O35350 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Capn1O35350 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Capn1O35350 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Capn1O35350 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Capn1O35350 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Capn1O35350 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Capn1O35350 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Capn1O35350 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Capn1O35350 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Capn1O35350 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Capn1O35350 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Capn1O35350 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.15■□□□□ 0.18
Capn1O35350 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Capn1O35350 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Capn1O35350 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Capn1O35350 Mir6349-201ENSMUST00000184059 97 ntBASIC16.15■□□□□ 0.18
Capn1O35350 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.15■□□□□ 0.18
Capn1O35350 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.15■□□□□ 0.18
Capn1O35350 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Capn1O35350 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Capn1O35350 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Capn1O35350 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Capn1O35350 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Capn1O35350 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Capn1O35350 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.15■□□□□ 0.18
Capn1O35350 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Capn1O35350 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.15■□□□□ 0.18
Capn1O35350 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Capn1O35350 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Capn1O35350 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Capn1O35350 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Capn1O35350 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Capn1O35350 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Capn1O35350 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.14■□□□□ 0.17
Capn1O35350 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Capn1O35350 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Capn1O35350 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Capn1O35350 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Capn1O35350 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Capn1O35350 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Capn1O35350 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms