Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Col15a1O35206 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Col15a1O35206 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Col15a1O35206 Gm19721-201ENSMUST00000195284 1764 ntBASIC22.48■■□□□ 1.19
Col15a1O35206 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Col15a1O35206 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Col15a1O35206 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC22.48■■□□□ 1.19
Col15a1O35206 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Col15a1O35206 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Col15a1O35206 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Col15a1O35206 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Col15a1O35206 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC22.47■■□□□ 1.19
Col15a1O35206 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Col15a1O35206 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
Col15a1O35206 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Col15a1O35206 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
Col15a1O35206 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Col15a1O35206 Gm34391-201ENSMUST00000203706 907 ntBASIC22.47■■□□□ 1.19
Col15a1O35206 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Col15a1O35206 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Col15a1O35206 Gm45141-201ENSMUST00000206502 1888 ntBASIC22.47■■□□□ 1.19
Col15a1O35206 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Col15a1O35206 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Col15a1O35206 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Col15a1O35206 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Col15a1O35206 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Col15a1O35206 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Col15a1O35206 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Col15a1O35206 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Col15a1O35206 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Col15a1O35206 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Col15a1O35206 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Col15a1O35206 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Col15a1O35206 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Col15a1O35206 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Col15a1O35206 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Col15a1O35206 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Col15a1O35206 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Col15a1O35206 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Col15a1O35206 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Col15a1O35206 Gm24589-201ENSMUST00000116692 94 ntBASIC22.45■■□□□ 1.18
Col15a1O35206 Gm15794-201ENSMUST00000120182 631 ntBASIC22.45■■□□□ 1.18
Col15a1O35206 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Col15a1O35206 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Col15a1O35206 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC22.45■■□□□ 1.18
Col15a1O35206 Gm45328-201ENSMUST00000210942 917 ntBASIC22.45■■□□□ 1.18
Col15a1O35206 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Col15a1O35206 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC22.45■■□□□ 1.18
Col15a1O35206 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Col15a1O35206 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Col15a1O35206 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Col15a1O35206 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
Col15a1O35206 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Col15a1O35206 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Col15a1O35206 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Col15a1O35206 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Col15a1O35206 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Col15a1O35206 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Col15a1O35206 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
Col15a1O35206 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
Col15a1O35206 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Col15a1O35206 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Col15a1O35206 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Col15a1O35206 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Col15a1O35206 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Col15a1O35206 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
Col15a1O35206 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Col15a1O35206 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Col15a1O35206 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Col15a1O35206 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Col15a1O35206 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Col15a1O35206 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Col15a1O35206 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Col15a1O35206 Spr-ps1-201ENSMUST00000089584 605 ntBASIC22.43■■□□□ 1.18
Col15a1O35206 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Col15a1O35206 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Col15a1O35206 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Col15a1O35206 Cxcl14-202ENSMUST00000224801 1467 ntBASIC22.43■■□□□ 1.18
Col15a1O35206 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Col15a1O35206 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Col15a1O35206 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Col15a1O35206 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Col15a1O35206 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
Col15a1O35206 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Col15a1O35206 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Col15a1O35206 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Col15a1O35206 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Col15a1O35206 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Col15a1O35206 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Col15a1O35206 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Col15a1O35206 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Col15a1O35206 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Col15a1O35206 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC22.41■■□□□ 1.18
Col15a1O35206 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Col15a1O35206 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Col15a1O35206 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Col15a1O35206 Gm44771-201ENSMUST00000206975 626 ntBASIC22.41■■□□□ 1.18
Col15a1O35206 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Col15a1O35206 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Col15a1O35206 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC22.41■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms