Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Ube3aO08759 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.91■□□□□ 0.62
Ube3aO08759 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.91■□□□□ 0.62
Ube3aO08759 AV356131-201ENSMUST00000206201 750 ntBASIC18.91■□□□□ 0.62
Ube3aO08759 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.91■□□□□ 0.62
Ube3aO08759 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.91■□□□□ 0.62
Ube3aO08759 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ube3aO08759 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ube3aO08759 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ube3aO08759 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Ube3aO08759 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Ube3aO08759 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ube3aO08759 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ube3aO08759 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ube3aO08759 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ube3aO08759 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.9■□□□□ 0.62
Ube3aO08759 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ube3aO08759 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.9■□□□□ 0.62
Ube3aO08759 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Ube3aO08759 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ube3aO08759 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ube3aO08759 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.9■□□□□ 0.62
Ube3aO08759 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ube3aO08759 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ube3aO08759 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ube3aO08759 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.9■□□□□ 0.62
Ube3aO08759 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ube3aO08759 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ube3aO08759 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ube3aO08759 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Ube3aO08759 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ube3aO08759 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Ube3aO08759 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Ube3aO08759 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Ube3aO08759 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ube3aO08759 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ube3aO08759 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Ube3aO08759 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ube3aO08759 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ube3aO08759 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ube3aO08759 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
Ube3aO08759 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Ube3aO08759 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.89■□□□□ 0.61
Ube3aO08759 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ube3aO08759 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ube3aO08759 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ube3aO08759 Gm29257-201ENSMUST00000186115 639 ntBASIC18.89■□□□□ 0.61
Ube3aO08759 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ube3aO08759 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ube3aO08759 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Ube3aO08759 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ube3aO08759 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ube3aO08759 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Ube3aO08759 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ube3aO08759 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ube3aO08759 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ube3aO08759 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ube3aO08759 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ube3aO08759 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ube3aO08759 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
Ube3aO08759 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ube3aO08759 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ube3aO08759 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ube3aO08759 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Ube3aO08759 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ube3aO08759 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ube3aO08759 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ube3aO08759 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Ube3aO08759 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ube3aO08759 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Ube3aO08759 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ube3aO08759 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ube3aO08759 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ube3aO08759 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ube3aO08759 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.87■□□□□ 0.61
Ube3aO08759 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.87■□□□□ 0.61
Ube3aO08759 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Ube3aO08759 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ube3aO08759 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.87■□□□□ 0.61
Ube3aO08759 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ube3aO08759 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.87■□□□□ 0.61
Ube3aO08759 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ube3aO08759 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ube3aO08759 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ube3aO08759 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ube3aO08759 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ube3aO08759 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ube3aO08759 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ube3aO08759 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ube3aO08759 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Ube3aO08759 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ube3aO08759 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ube3aO08759 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.86■□□□□ 0.61
Ube3aO08759 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ube3aO08759 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ube3aO08759 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ube3aO08759 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ube3aO08759 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ube3aO08759 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ube3aO08759 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms