Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Gm28043E0CXC2 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm28043E0CXC2 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm28043E0CXC2 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Gm28043E0CXC2 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm28043E0CXC2 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm28043E0CXC2 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm28043E0CXC2 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm28043E0CXC2 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm28043E0CXC2 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm28043E0CXC2 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Gm28043E0CXC2 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm28043E0CXC2 Gm22325-201ENSMUST00000158904 308 ntBASIC17.53■□□□□ 0.4
Gm28043E0CXC2 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm28043E0CXC2 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Gm28043E0CXC2 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Gm28043E0CXC2 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm28043E0CXC2 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm28043E0CXC2 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm28043E0CXC2 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Gm28043E0CXC2 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm28043E0CXC2 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm28043E0CXC2 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm28043E0CXC2 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm28043E0CXC2 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm28043E0CXC2 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.53■□□□□ 0.4
Gm28043E0CXC2 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Gm28043E0CXC2 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Gm28043E0CXC2 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm28043E0CXC2 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm28043E0CXC2 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm28043E0CXC2 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm28043E0CXC2 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm28043E0CXC2 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Gm28043E0CXC2 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm28043E0CXC2 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Gm28043E0CXC2 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Gm28043E0CXC2 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Gm28043E0CXC2 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm28043E0CXC2 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.52■□□□□ 0.4
Gm28043E0CXC2 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Gm28043E0CXC2 Gm26524-201ENSMUST00000192339 390 ntBASIC17.52■□□□□ 0.4
Gm28043E0CXC2 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Gm28043E0CXC2 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm28043E0CXC2 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm28043E0CXC2 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Gm28043E0CXC2 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Gm28043E0CXC2 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Gm28043E0CXC2 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Gm28043E0CXC2 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Gm28043E0CXC2 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Gm28043E0CXC2 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm28043E0CXC2 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.51■□□□□ 0.39
Gm28043E0CXC2 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Gm28043E0CXC2 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.51■□□□□ 0.39
Gm28043E0CXC2 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm28043E0CXC2 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm28043E0CXC2 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm28043E0CXC2 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm28043E0CXC2 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Gm28043E0CXC2 Gm10602-201ENSMUST00000098239 609 ntBASIC17.51■□□□□ 0.39
Gm28043E0CXC2 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm28043E0CXC2 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Gm28043E0CXC2 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm28043E0CXC2 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Gm28043E0CXC2 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.51■□□□□ 0.39
Gm28043E0CXC2 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm28043E0CXC2 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm28043E0CXC2 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm28043E0CXC2 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm28043E0CXC2 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm28043E0CXC2 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm28043E0CXC2 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Gm28043E0CXC2 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm28043E0CXC2 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.5■□□□□ 0.39
Gm28043E0CXC2 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm28043E0CXC2 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Gm28043E0CXC2 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.5■□□□□ 0.39
Gm28043E0CXC2 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm28043E0CXC2 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Gm28043E0CXC2 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Gm28043E0CXC2 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Gm28043E0CXC2 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm28043E0CXC2 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Gm28043E0CXC2 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Gm28043E0CXC2 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Gm28043E0CXC2 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm28043E0CXC2 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm28043E0CXC2 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm28043E0CXC2 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm28043E0CXC2 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm28043E0CXC2 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm28043E0CXC2 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Gm28043E0CXC2 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm28043E0CXC2 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Gm28043E0CXC2 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gm28043E0CXC2 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Gm28043E0CXC2 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Gm28043E0CXC2 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Gm28043E0CXC2 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms