Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Nkx6-2D3Z4R4 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx6-2D3Z4R4 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx6-2D3Z4R4 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx6-2D3Z4R4 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx6-2D3Z4R4 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Nkx6-2D3Z4R4 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx6-2D3Z4R4 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nkx6-2D3Z4R4 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.27□□□□□ -0.12
Nkx6-2D3Z4R4 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Nkx6-2D3Z4R4 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC14.27□□□□□ -0.13
Nkx6-2D3Z4R4 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx6-2D3Z4R4 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC14.27□□□□□ -0.13
Nkx6-2D3Z4R4 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.27□□□□□ -0.13
Nkx6-2D3Z4R4 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Nkx6-2D3Z4R4 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx6-2D3Z4R4 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nkx6-2D3Z4R4 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx6-2D3Z4R4 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx6-2D3Z4R4 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.26□□□□□ -0.13
Nkx6-2D3Z4R4 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx6-2D3Z4R4 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Nkx6-2D3Z4R4 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx6-2D3Z4R4 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx6-2D3Z4R4 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.26□□□□□ -0.13
Nkx6-2D3Z4R4 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx6-2D3Z4R4 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx6-2D3Z4R4 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx6-2D3Z4R4 Gm43566-201ENSMUST00000196851 808 ntBASIC14.26□□□□□ -0.13
Nkx6-2D3Z4R4 Gm10232-201ENSMUST00000089221 720 ntBASIC14.26□□□□□ -0.13
Nkx6-2D3Z4R4 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx6-2D3Z4R4 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Nkx6-2D3Z4R4 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx6-2D3Z4R4 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx6-2D3Z4R4 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Nkx6-2D3Z4R4 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx6-2D3Z4R4 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx6-2D3Z4R4 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx6-2D3Z4R4 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx6-2D3Z4R4 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Nkx6-2D3Z4R4 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx6-2D3Z4R4 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Nkx6-2D3Z4R4 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx6-2D3Z4R4 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Nkx6-2D3Z4R4 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Nkx6-2D3Z4R4 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx6-2D3Z4R4 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx6-2D3Z4R4 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Nkx6-2D3Z4R4 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx6-2D3Z4R4 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Nkx6-2D3Z4R4 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Nkx6-2D3Z4R4 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx6-2D3Z4R4 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx6-2D3Z4R4 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx6-2D3Z4R4 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx6-2D3Z4R4 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Nkx6-2D3Z4R4 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx6-2D3Z4R4 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx6-2D3Z4R4 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx6-2D3Z4R4 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx6-2D3Z4R4 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx6-2D3Z4R4 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx6-2D3Z4R4 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx6-2D3Z4R4 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.24□□□□□ -0.13
Nkx6-2D3Z4R4 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx6-2D3Z4R4 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Nkx6-2D3Z4R4 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Nkx6-2D3Z4R4 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx6-2D3Z4R4 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC14.24□□□□□ -0.13
Nkx6-2D3Z4R4 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx6-2D3Z4R4 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.24□□□□□ -0.13
Nkx6-2D3Z4R4 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Nkx6-2D3Z4R4 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx6-2D3Z4R4 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx6-2D3Z4R4 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx6-2D3Z4R4 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx6-2D3Z4R4 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx6-2D3Z4R4 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx6-2D3Z4R4 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx6-2D3Z4R4 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx6-2D3Z4R4 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Nkx6-2D3Z4R4 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx6-2D3Z4R4 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx6-2D3Z4R4 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx6-2D3Z4R4 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Nkx6-2D3Z4R4 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx6-2D3Z4R4 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx6-2D3Z4R4 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx6-2D3Z4R4 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx6-2D3Z4R4 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Nkx6-2D3Z4R4 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC14.23□□□□□ -0.13
Nkx6-2D3Z4R4 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Nkx6-2D3Z4R4 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC14.23□□□□□ -0.13
Nkx6-2D3Z4R4 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx6-2D3Z4R4 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx6-2D3Z4R4 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx6-2D3Z4R4 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx6-2D3Z4R4 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkx6-2D3Z4R4 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Nkx6-2D3Z4R4 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms