Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.69□□□□□ -0.06
Col6a4A2AX52 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Col6a4A2AX52 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Col6a4A2AX52 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col6a4A2AX52 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col6a4A2AX52 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC14.69□□□□□ -0.06
Col6a4A2AX52 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col6a4A2AX52 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col6a4A2AX52 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC14.69□□□□□ -0.06
Col6a4A2AX52 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col6a4A2AX52 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.69□□□□□ -0.06
Col6a4A2AX52 Gm18958-201ENSMUST00000174258 762 ntBASIC14.69□□□□□ -0.06
Col6a4A2AX52 Mir3081-201ENSMUST00000175305 84 ntBASIC14.69□□□□□ -0.06
Col6a4A2AX52 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Col6a4A2AX52 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Col6a4A2AX52 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Col6a4A2AX52 Gm27525-201ENSMUST00000184465 107 ntBASIC14.69□□□□□ -0.06
Col6a4A2AX52 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col6a4A2AX52 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col6a4A2AX52 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col6a4A2AX52 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col6a4A2AX52 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col6a4A2AX52 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Col6a4A2AX52 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC14.68□□□□□ -0.06
Col6a4A2AX52 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col6a4A2AX52 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col6a4A2AX52 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col6a4A2AX52 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.68□□□□□ -0.06
Col6a4A2AX52 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Col6a4A2AX52 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col6a4A2AX52 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col6a4A2AX52 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col6a4A2AX52 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col6a4A2AX52 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col6a4A2AX52 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col6a4A2AX52 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col6a4A2AX52 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col6a4A2AX52 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col6a4A2AX52 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col6a4A2AX52 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col6a4A2AX52 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col6a4A2AX52 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col6a4A2AX52 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col6a4A2AX52 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Col6a4A2AX52 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col6a4A2AX52 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col6a4A2AX52 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col6a4A2AX52 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.67□□□□□ -0.06
Col6a4A2AX52 Gm42922-201ENSMUST00000195887 2078 ntBASIC14.67□□□□□ -0.06
Col6a4A2AX52 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col6a4A2AX52 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Col6a4A2AX52 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC14.67□□□□□ -0.06
Col6a4A2AX52 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col6a4A2AX52 Gm24589-201ENSMUST00000116692 94 ntBASIC14.67□□□□□ -0.06
Col6a4A2AX52 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col6a4A2AX52 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col6a4A2AX52 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.67□□□□□ -0.06
Col6a4A2AX52 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col6a4A2AX52 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Col6a4A2AX52 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col6a4A2AX52 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col6a4A2AX52 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col6a4A2AX52 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col6a4A2AX52 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Col6a4A2AX52 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.66□□□□□ -0.06
Col6a4A2AX52 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col6a4A2AX52 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col6a4A2AX52 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col6a4A2AX52 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col6a4A2AX52 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col6a4A2AX52 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Col6a4A2AX52 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Col6a4A2AX52 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col6a4A2AX52 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Col6a4A2AX52 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col6a4A2AX52 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col6a4A2AX52 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col6a4A2AX52 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col6a4A2AX52 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col6a4A2AX52 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col6a4A2AX52 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col6a4A2AX52 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col6a4A2AX52 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col6a4A2AX52 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col6a4A2AX52 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col6a4A2AX52 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col6a4A2AX52 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col6a4A2AX52 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col6a4A2AX52 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col6a4A2AX52 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col6a4A2AX52 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col6a4A2AX52 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col6a4A2AX52 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.65□□□□□ -0.06
Col6a4A2AX52 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col6a4A2AX52 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col6a4A2AX52 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col6a4A2AX52 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col6a4A2AX52 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Col6a4A2AX52 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col6a4A2AX52 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms