Protein–RNA interactions for Protein: A0A140T8Q4

Igkv3-4, Immunoglobulin kappa variable 3-4 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-4A0A140T8Q4 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Igkv3-4A0A140T8Q4 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Igkv3-4A0A140T8Q4 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Igkv3-4A0A140T8Q4 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Igkv3-4A0A140T8Q4 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Igkv3-4A0A140T8Q4 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Igkv3-4A0A140T8Q4 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Igkv3-4A0A140T8Q4 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Igkv3-4A0A140T8Q4 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Igkv3-4A0A140T8Q4 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv3-4A0A140T8Q4 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv3-4A0A140T8Q4 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv3-4A0A140T8Q4 Gm43808-201ENSMUST00000202534 2065 ntBASIC10.96□□□□□ -0.65
Igkv3-4A0A140T8Q4 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv3-4A0A140T8Q4 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv3-4A0A140T8Q4 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Igkv3-4A0A140T8Q4 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv3-4A0A140T8Q4 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv3-4A0A140T8Q4 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv3-4A0A140T8Q4 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv3-4A0A140T8Q4 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv3-4A0A140T8Q4 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv3-4A0A140T8Q4 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv3-4A0A140T8Q4 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv3-4A0A140T8Q4 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv3-4A0A140T8Q4 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv3-4A0A140T8Q4 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv3-4A0A140T8Q4 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv3-4A0A140T8Q4 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC10.96□□□□□ -0.65
Igkv3-4A0A140T8Q4 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Igkv3-4A0A140T8Q4 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Igkv3-4A0A140T8Q4 Gm37194-201ENSMUST00000193092 3031 ntBASIC10.96□□□□□ -0.66
Igkv3-4A0A140T8Q4 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Igkv3-4A0A140T8Q4 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Igkv3-4A0A140T8Q4 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Igkv3-4A0A140T8Q4 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Igkv3-4A0A140T8Q4 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Igkv3-4A0A140T8Q4 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Igkv3-4A0A140T8Q4 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC10.95□□□□□ -0.66
Igkv3-4A0A140T8Q4 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-4A0A140T8Q4 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-4A0A140T8Q4 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-4A0A140T8Q4 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-4A0A140T8Q4 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-4A0A140T8Q4 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-4A0A140T8Q4 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-4A0A140T8Q4 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-4A0A140T8Q4 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-4A0A140T8Q4 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-4A0A140T8Q4 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC10.95□□□□□ -0.66
Igkv3-4A0A140T8Q4 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Igkv3-4A0A140T8Q4 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-4A0A140T8Q4 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Igkv3-4A0A140T8Q4 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-4A0A140T8Q4 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-4A0A140T8Q4 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Igkv3-4A0A140T8Q4 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-4A0A140T8Q4 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-4A0A140T8Q4 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-4A0A140T8Q4 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-4A0A140T8Q4 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC10.95□□□□□ -0.66
Igkv3-4A0A140T8Q4 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-4A0A140T8Q4 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-4A0A140T8Q4 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-4A0A140T8Q4 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-4A0A140T8Q4 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-4A0A140T8Q4 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-4A0A140T8Q4 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-4A0A140T8Q4 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-4A0A140T8Q4 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-4A0A140T8Q4 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-4A0A140T8Q4 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Igkv3-4A0A140T8Q4 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Igkv3-4A0A140T8Q4 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Igkv3-4A0A140T8Q4 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Igkv3-4A0A140T8Q4 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv3-4A0A140T8Q4 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv3-4A0A140T8Q4 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv3-4A0A140T8Q4 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC10.94□□□□□ -0.66
Igkv3-4A0A140T8Q4 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv3-4A0A140T8Q4 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Igkv3-4A0A140T8Q4 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv3-4A0A140T8Q4 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Igkv3-4A0A140T8Q4 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv3-4A0A140T8Q4 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv3-4A0A140T8Q4 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Igkv3-4A0A140T8Q4 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC10.94□□□□□ -0.66
Igkv3-4A0A140T8Q4 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv3-4A0A140T8Q4 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Igkv3-4A0A140T8Q4 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv3-4A0A140T8Q4 Gm45412-201ENSMUST00000210217 2275 ntBASIC10.94□□□□□ -0.66
Igkv3-4A0A140T8Q4 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv3-4A0A140T8Q4 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv3-4A0A140T8Q4 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv3-4A0A140T8Q4 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Igkv3-4A0A140T8Q4 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv3-4A0A140T8Q4 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv3-4A0A140T8Q4 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv3-4A0A140T8Q4 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Igkv3-4A0A140T8Q4 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms