Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igkv1-88A0A140T8N1 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Igkv1-88A0A140T8N1 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC11.58□□□□□ -0.56
Igkv1-88A0A140T8N1 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igkv1-88A0A140T8N1 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igkv1-88A0A140T8N1 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC11.58□□□□□ -0.56
Igkv1-88A0A140T8N1 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igkv1-88A0A140T8N1 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igkv1-88A0A140T8N1 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igkv1-88A0A140T8N1 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igkv1-88A0A140T8N1 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC11.58□□□□□ -0.56
Igkv1-88A0A140T8N1 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Igkv1-88A0A140T8N1 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Igkv1-88A0A140T8N1 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Igkv1-88A0A140T8N1 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Igkv1-88A0A140T8N1 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Igkv1-88A0A140T8N1 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Igkv1-88A0A140T8N1 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Igkv1-88A0A140T8N1 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Igkv1-88A0A140T8N1 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Igkv1-88A0A140T8N1 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Igkv1-88A0A140T8N1 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Igkv1-88A0A140T8N1 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Igkv1-88A0A140T8N1 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Igkv1-88A0A140T8N1 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Igkv1-88A0A140T8N1 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Igkv1-88A0A140T8N1 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Igkv1-88A0A140T8N1 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC11.57□□□□□ -0.56
Igkv1-88A0A140T8N1 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Igkv1-88A0A140T8N1 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Igkv1-88A0A140T8N1 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Igkv1-88A0A140T8N1 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Igkv1-88A0A140T8N1 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC11.57□□□□□ -0.56
Igkv1-88A0A140T8N1 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Igkv1-88A0A140T8N1 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Igkv1-88A0A140T8N1 Gm37374-201ENSMUST00000194954 1829 ntBASIC11.57□□□□□ -0.56
Igkv1-88A0A140T8N1 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Igkv1-88A0A140T8N1 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Igkv1-88A0A140T8N1 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Igkv1-88A0A140T8N1 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC11.57□□□□□ -0.56
Igkv1-88A0A140T8N1 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Igkv1-88A0A140T8N1 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Igkv1-88A0A140T8N1 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Igkv1-88A0A140T8N1 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Igkv1-88A0A140T8N1 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Igkv1-88A0A140T8N1 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Igkv1-88A0A140T8N1 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Igkv1-88A0A140T8N1 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Igkv1-88A0A140T8N1 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Igkv1-88A0A140T8N1 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Igkv1-88A0A140T8N1 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Igkv1-88A0A140T8N1 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Igkv1-88A0A140T8N1 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Igkv1-88A0A140T8N1 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC11.56□□□□□ -0.56
Igkv1-88A0A140T8N1 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC11.56□□□□□ -0.56
Igkv1-88A0A140T8N1 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Igkv1-88A0A140T8N1 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Igkv1-88A0A140T8N1 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Igkv1-88A0A140T8N1 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC11.56□□□□□ -0.56
Igkv1-88A0A140T8N1 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Igkv1-88A0A140T8N1 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Igkv1-88A0A140T8N1 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Igkv1-88A0A140T8N1 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Igkv1-88A0A140T8N1 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Igkv1-88A0A140T8N1 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Igkv1-88A0A140T8N1 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Igkv1-88A0A140T8N1 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Igkv1-88A0A140T8N1 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC11.56□□□□□ -0.56
Igkv1-88A0A140T8N1 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Igkv1-88A0A140T8N1 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Igkv1-88A0A140T8N1 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Igkv1-88A0A140T8N1 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Igkv1-88A0A140T8N1 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC11.55□□□□□ -0.56
Igkv1-88A0A140T8N1 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Igkv1-88A0A140T8N1 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
Igkv1-88A0A140T8N1 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC11.55□□□□□ -0.56
Igkv1-88A0A140T8N1 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Igkv1-88A0A140T8N1 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC11.55□□□□□ -0.56
Igkv1-88A0A140T8N1 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Igkv1-88A0A140T8N1 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Igkv1-88A0A140T8N1 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Igkv1-88A0A140T8N1 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Igkv1-88A0A140T8N1 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Igkv1-88A0A140T8N1 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Igkv1-88A0A140T8N1 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Igkv1-88A0A140T8N1 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Igkv1-88A0A140T8N1 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Igkv1-88A0A140T8N1 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Igkv1-88A0A140T8N1 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Igkv1-88A0A140T8N1 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Igkv1-88A0A140T8N1 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Igkv1-88A0A140T8N1 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Igkv1-88A0A140T8N1 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC11.54□□□□□ -0.56
Igkv1-88A0A140T8N1 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Igkv1-88A0A140T8N1 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Igkv1-88A0A140T8N1 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Igkv1-88A0A140T8N1 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Igkv1-88A0A140T8N1 Gm42778-201ENSMUST00000199644 553 ntBASIC11.54□□□□□ -0.56
Igkv1-88A0A140T8N1 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Igkv1-88A0A140T8N1 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms