Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Trav4-3A0A0B4J1K1 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav4-3A0A0B4J1K1 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trav4-3A0A0B4J1K1 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav4-3A0A0B4J1K1 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trav4-3A0A0B4J1K1 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav4-3A0A0B4J1K1 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav4-3A0A0B4J1K1 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav4-3A0A0B4J1K1 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav4-3A0A0B4J1K1 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav4-3A0A0B4J1K1 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trav4-3A0A0B4J1K1 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav4-3A0A0B4J1K1 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav4-3A0A0B4J1K1 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav4-3A0A0B4J1K1 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav4-3A0A0B4J1K1 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav4-3A0A0B4J1K1 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav4-3A0A0B4J1K1 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav4-3A0A0B4J1K1 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav4-3A0A0B4J1K1 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trav4-3A0A0B4J1K1 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Trav4-3A0A0B4J1K1 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav4-3A0A0B4J1K1 AC160393.1-201ENSMUST00000218378 1279 ntBASIC11.94□□□□□ -0.5
Trav4-3A0A0B4J1K1 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav4-3A0A0B4J1K1 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC11.94□□□□□ -0.5
Trav4-3A0A0B4J1K1 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav4-3A0A0B4J1K1 Gm9867-201ENSMUST00000192212 2647 ntBASIC11.94□□□□□ -0.5
Trav4-3A0A0B4J1K1 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav4-3A0A0B4J1K1 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav4-3A0A0B4J1K1 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav4-3A0A0B4J1K1 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav4-3A0A0B4J1K1 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav4-3A0A0B4J1K1 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav4-3A0A0B4J1K1 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav4-3A0A0B4J1K1 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav4-3A0A0B4J1K1 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav4-3A0A0B4J1K1 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav4-3A0A0B4J1K1 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav4-3A0A0B4J1K1 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav4-3A0A0B4J1K1 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav4-3A0A0B4J1K1 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC11.93□□□□□ -0.5
Trav4-3A0A0B4J1K1 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav4-3A0A0B4J1K1 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav4-3A0A0B4J1K1 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC11.93□□□□□ -0.5
Trav4-3A0A0B4J1K1 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav4-3A0A0B4J1K1 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav4-3A0A0B4J1K1 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trav4-3A0A0B4J1K1 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav4-3A0A0B4J1K1 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
Trav4-3A0A0B4J1K1 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trav4-3A0A0B4J1K1 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav4-3A0A0B4J1K1 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav4-3A0A0B4J1K1 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav4-3A0A0B4J1K1 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav4-3A0A0B4J1K1 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav4-3A0A0B4J1K1 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trav4-3A0A0B4J1K1 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav4-3A0A0B4J1K1 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav4-3A0A0B4J1K1 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav4-3A0A0B4J1K1 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Trav4-3A0A0B4J1K1 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav4-3A0A0B4J1K1 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav4-3A0A0B4J1K1 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav4-3A0A0B4J1K1 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav4-3A0A0B4J1K1 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trav4-3A0A0B4J1K1 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav4-3A0A0B4J1K1 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Trav4-3A0A0B4J1K1 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav4-3A0A0B4J1K1 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav4-3A0A0B4J1K1 Gm22325-201ENSMUST00000158904 308 ntBASIC11.92□□□□□ -0.5
Trav4-3A0A0B4J1K1 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav4-3A0A0B4J1K1 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav4-3A0A0B4J1K1 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav4-3A0A0B4J1K1 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trav4-3A0A0B4J1K1 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trav4-3A0A0B4J1K1 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Trav4-3A0A0B4J1K1 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav4-3A0A0B4J1K1 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav4-3A0A0B4J1K1 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trav4-3A0A0B4J1K1 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav4-3A0A0B4J1K1 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav4-3A0A0B4J1K1 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trav4-3A0A0B4J1K1 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trav4-3A0A0B4J1K1 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav4-3A0A0B4J1K1 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav4-3A0A0B4J1K1 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav4-3A0A0B4J1K1 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav4-3A0A0B4J1K1 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav4-3A0A0B4J1K1 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav4-3A0A0B4J1K1 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav4-3A0A0B4J1K1 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav4-3A0A0B4J1K1 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav4-3A0A0B4J1K1 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav4-3A0A0B4J1K1 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav4-3A0A0B4J1K1 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trav4-3A0A0B4J1K1 Gm8839-201ENSMUST00000121279 1645 ntBASIC11.91□□□□□ -0.5
Trav4-3A0A0B4J1K1 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav4-3A0A0B4J1K1 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Trav4-3A0A0B4J1K1 AC069562.2-201ENSMUST00000224644 2146 ntBASIC11.91□□□□□ -0.5
Trav4-3A0A0B4J1K1 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms