Protein–RNA interactions for Protein: A0A0A6YXG2

Ighv1-56, Immunoglobulin heavy variable 1-56 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-56A0A0A6YXG2 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ighv1-56A0A0A6YXG2 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
Ighv1-56A0A0A6YXG2 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ighv1-56A0A0A6YXG2 AV356131-201ENSMUST00000206201 750 ntBASIC11.76□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC11.76□□□□□ -0.53
Ighv1-56A0A0A6YXG2 AC140264.2-202ENSMUST00000218746 817 ntBASIC11.76□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC11.76□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC11.76□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC11.76□□□□□ -0.53
Ighv1-56A0A0A6YXG2 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC11.75□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC11.75□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC11.75□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Ighv1-56A0A0A6YXG2 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC11.75□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC11.75□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC11.74□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC11.74□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC11.74□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC11.74□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC11.74□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC11.74□□□□□ -0.53
Ighv1-56A0A0A6YXG2 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC11.74□□□□□ -0.53
Ighv1-56A0A0A6YXG2 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Gm5874-201ENSMUST00000096101 508 ntBASIC11.74□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC11.74□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Ighv1-56A0A0A6YXG2 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms