Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav21-dv12A0A075B6C4 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav21-dv12A0A075B6C4 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav21-dv12A0A075B6C4 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav21-dv12A0A075B6C4 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav21-dv12A0A075B6C4 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trav21-dv12A0A075B6C4 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav21-dv12A0A075B6C4 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav21-dv12A0A075B6C4 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC13.45□□□□□ -0.26
Trav21-dv12A0A075B6C4 Flg-201ENSMUST00000050758 1488 ntBASIC13.45□□□□□ -0.26
Trav21-dv12A0A075B6C4 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav21-dv12A0A075B6C4 Gm26524-201ENSMUST00000192339 390 ntBASIC13.45□□□□□ -0.26
Trav21-dv12A0A075B6C4 Gm38285-201ENSMUST00000192928 922 ntBASIC13.45□□□□□ -0.26
Trav21-dv12A0A075B6C4 Gm8969-201ENSMUST00000199694 526 ntBASIC13.45□□□□□ -0.26
Trav21-dv12A0A075B6C4 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC13.45□□□□□ -0.26
Trav21-dv12A0A075B6C4 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav21-dv12A0A075B6C4 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trav21-dv12A0A075B6C4 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav21-dv12A0A075B6C4 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trav21-dv12A0A075B6C4 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav21-dv12A0A075B6C4 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav21-dv12A0A075B6C4 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav21-dv12A0A075B6C4 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav21-dv12A0A075B6C4 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav21-dv12A0A075B6C4 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav21-dv12A0A075B6C4 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trav21-dv12A0A075B6C4 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav21-dv12A0A075B6C4 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav21-dv12A0A075B6C4 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav21-dv12A0A075B6C4 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav21-dv12A0A075B6C4 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav21-dv12A0A075B6C4 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav21-dv12A0A075B6C4 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav21-dv12A0A075B6C4 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav21-dv12A0A075B6C4 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav21-dv12A0A075B6C4 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav21-dv12A0A075B6C4 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC13.44□□□□□ -0.26
Trav21-dv12A0A075B6C4 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC13.44□□□□□ -0.26
Trav21-dv12A0A075B6C4 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav21-dv12A0A075B6C4 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav21-dv12A0A075B6C4 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trav21-dv12A0A075B6C4 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav21-dv12A0A075B6C4 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav21-dv12A0A075B6C4 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav21-dv12A0A075B6C4 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Trav21-dv12A0A075B6C4 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav21-dv12A0A075B6C4 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav21-dv12A0A075B6C4 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav21-dv12A0A075B6C4 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav21-dv12A0A075B6C4 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav21-dv12A0A075B6C4 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav21-dv12A0A075B6C4 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav21-dv12A0A075B6C4 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav21-dv12A0A075B6C4 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav21-dv12A0A075B6C4 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav21-dv12A0A075B6C4 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav21-dv12A0A075B6C4 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav21-dv12A0A075B6C4 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav21-dv12A0A075B6C4 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav21-dv12A0A075B6C4 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav21-dv12A0A075B6C4 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav21-dv12A0A075B6C4 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav21-dv12A0A075B6C4 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trav21-dv12A0A075B6C4 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav21-dv12A0A075B6C4 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav21-dv12A0A075B6C4 Gm37179-201ENSMUST00000194862 823 ntBASIC13.43□□□□□ -0.26
Trav21-dv12A0A075B6C4 Gm44672-201ENSMUST00000206944 1098 ntBASIC13.43□□□□□ -0.26
Trav21-dv12A0A075B6C4 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC13.43□□□□□ -0.26
Trav21-dv12A0A075B6C4 Wnt10b-205ENSMUST00000226846 1204 ntBASIC13.43□□□□□ -0.26
Trav21-dv12A0A075B6C4 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav21-dv12A0A075B6C4 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav21-dv12A0A075B6C4 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav21-dv12A0A075B6C4 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav21-dv12A0A075B6C4 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav21-dv12A0A075B6C4 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav21-dv12A0A075B6C4 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Trav21-dv12A0A075B6C4 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav21-dv12A0A075B6C4 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trav21-dv12A0A075B6C4 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav21-dv12A0A075B6C4 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav21-dv12A0A075B6C4 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav21-dv12A0A075B6C4 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav21-dv12A0A075B6C4 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav21-dv12A0A075B6C4 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav21-dv12A0A075B6C4 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trav21-dv12A0A075B6C4 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav21-dv12A0A075B6C4 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav21-dv12A0A075B6C4 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Trav21-dv12A0A075B6C4 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav21-dv12A0A075B6C4 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav21-dv12A0A075B6C4 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trav21-dv12A0A075B6C4 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trav21-dv12A0A075B6C4 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav21-dv12A0A075B6C4 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav21-dv12A0A075B6C4 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav21-dv12A0A075B6C4 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trav21-dv12A0A075B6C4 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav21-dv12A0A075B6C4 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav21-dv12A0A075B6C4 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC13.42□□□□□ -0.26
Trav21-dv12A0A075B6C4 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms