Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav5-4A0A075B652 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav5-4A0A075B652 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Trav5-4A0A075B652 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trav5-4A0A075B652 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav5-4A0A075B652 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav5-4A0A075B652 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav5-4A0A075B652 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav5-4A0A075B652 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav5-4A0A075B652 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav5-4A0A075B652 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trav5-4A0A075B652 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.59□□□□□ -0.07
Trav5-4A0A075B652 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav5-4A0A075B652 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav5-4A0A075B652 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
Trav5-4A0A075B652 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav5-4A0A075B652 Gm26524-201ENSMUST00000192339 390 ntBASIC14.59□□□□□ -0.07
Trav5-4A0A075B652 Gm38285-201ENSMUST00000192928 922 ntBASIC14.59□□□□□ -0.07
Trav5-4A0A075B652 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav5-4A0A075B652 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav5-4A0A075B652 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav5-4A0A075B652 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav5-4A0A075B652 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav5-4A0A075B652 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trav5-4A0A075B652 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav5-4A0A075B652 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav5-4A0A075B652 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav5-4A0A075B652 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Trav5-4A0A075B652 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav5-4A0A075B652 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav5-4A0A075B652 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav5-4A0A075B652 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trav5-4A0A075B652 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trav5-4A0A075B652 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav5-4A0A075B652 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav5-4A0A075B652 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav5-4A0A075B652 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav5-4A0A075B652 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav5-4A0A075B652 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.07
Trav5-4A0A075B652 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav5-4A0A075B652 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.58□□□□□ -0.07
Trav5-4A0A075B652 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav5-4A0A075B652 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav5-4A0A075B652 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
Trav5-4A0A075B652 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav5-4A0A075B652 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav5-4A0A075B652 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav5-4A0A075B652 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav5-4A0A075B652 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav5-4A0A075B652 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.58□□□□□ -0.08
Trav5-4A0A075B652 Rab3c-203ENSMUST00000224180 967 ntBASIC14.58□□□□□ -0.08
Trav5-4A0A075B652 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav5-4A0A075B652 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav5-4A0A075B652 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav5-4A0A075B652 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
Trav5-4A0A075B652 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav5-4A0A075B652 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav5-4A0A075B652 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav5-4A0A075B652 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Trav5-4A0A075B652 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav5-4A0A075B652 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav5-4A0A075B652 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.57□□□□□ -0.08
Trav5-4A0A075B652 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5-4A0A075B652 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5-4A0A075B652 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5-4A0A075B652 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav5-4A0A075B652 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5-4A0A075B652 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5-4A0A075B652 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav5-4A0A075B652 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5-4A0A075B652 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5-4A0A075B652 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5-4A0A075B652 Gm37179-201ENSMUST00000194862 823 ntBASIC14.57□□□□□ -0.08
Trav5-4A0A075B652 Gm8969-201ENSMUST00000199694 526 ntBASIC14.57□□□□□ -0.08
Trav5-4A0A075B652 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC14.57□□□□□ -0.08
Trav5-4A0A075B652 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5-4A0A075B652 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5-4A0A075B652 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5-4A0A075B652 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5-4A0A075B652 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5-4A0A075B652 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5-4A0A075B652 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5-4A0A075B652 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5-4A0A075B652 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5-4A0A075B652 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5-4A0A075B652 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5-4A0A075B652 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5-4A0A075B652 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5-4A0A075B652 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav5-4A0A075B652 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trav5-4A0A075B652 Flg-201ENSMUST00000050758 1488 ntBASIC14.57□□□□□ -0.08
Trav5-4A0A075B652 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav5-4A0A075B652 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.56□□□□□ -0.08
Trav5-4A0A075B652 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav5-4A0A075B652 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trav5-4A0A075B652 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav5-4A0A075B652 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav5-4A0A075B652 Gm5408-201ENSMUST00000197998 747 ntBASIC14.56□□□□□ -0.08
Trav5-4A0A075B652 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC14.56□□□□□ -0.08
Trav5-4A0A075B652 Wnt10b-205ENSMUST00000226846 1204 ntBASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms