Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.33□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Gm2011-201ENSMUST00000203124 1263 ntBASIC14.32□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Gm10129-202ENSMUST00000193100 1316 ntBASIC14.3□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.3□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.3□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Haglr-201ENSMUST00000100000 2085 ntBASIC14.29□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.28□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC14.28□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC14.28□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.28□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Gm42778-201ENSMUST00000199644 553 ntBASIC14.28□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Ap3s1-204ENSMUST00000225520 957 ntBASIC14.28□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.28□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav15-2-dv6-2A0A075B650 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms