Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav6-7-dv9A0A075B639 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav6-7-dv9A0A075B639 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Trav6-7-dv9A0A075B639 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav6-7-dv9A0A075B639 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav6-7-dv9A0A075B639 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Trav6-7-dv9A0A075B639 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6-7-dv9A0A075B639 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6-7-dv9A0A075B639 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6-7-dv9A0A075B639 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6-7-dv9A0A075B639 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6-7-dv9A0A075B639 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.51■□□□□ 0.07
Trav6-7-dv9A0A075B639 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6-7-dv9A0A075B639 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trav6-7-dv9A0A075B639 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.51■□□□□ 0.07
Trav6-7-dv9A0A075B639 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC15.51■□□□□ 0.07
Trav6-7-dv9A0A075B639 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6-7-dv9A0A075B639 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6-7-dv9A0A075B639 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6-7-dv9A0A075B639 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6-7-dv9A0A075B639 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.51■□□□□ 0.07
Trav6-7-dv9A0A075B639 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6-7-dv9A0A075B639 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trav6-7-dv9A0A075B639 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6-7-dv9A0A075B639 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6-7-dv9A0A075B639 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6-7-dv9A0A075B639 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6-7-dv9A0A075B639 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6-7-dv9A0A075B639 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6-7-dv9A0A075B639 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6-7-dv9A0A075B639 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6-7-dv9A0A075B639 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6-7-dv9A0A075B639 Gm13401-201ENSMUST00000117074 291 ntBASIC15.5■□□□□ 0.07
Trav6-7-dv9A0A075B639 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6-7-dv9A0A075B639 Alkbh1-212ENSMUST00000185301 408 ntBASIC15.5■□□□□ 0.07
Trav6-7-dv9A0A075B639 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Trav6-7-dv9A0A075B639 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6-7-dv9A0A075B639 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6-7-dv9A0A075B639 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6-7-dv9A0A075B639 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-7-dv9A0A075B639 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-7-dv9A0A075B639 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trav6-7-dv9A0A075B639 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-7-dv9A0A075B639 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-7-dv9A0A075B639 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-7-dv9A0A075B639 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-7-dv9A0A075B639 Gm13158-201ENSMUST00000122007 736 ntBASIC15.49■□□□□ 0.07
Trav6-7-dv9A0A075B639 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC15.49■□□□□ 0.07
Trav6-7-dv9A0A075B639 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC15.49■□□□□ 0.07
Trav6-7-dv9A0A075B639 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-7-dv9A0A075B639 AC163280.1-201ENSMUST00000228194 1100 ntBASIC15.49■□□□□ 0.07
Trav6-7-dv9A0A075B639 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.49■□□□□ 0.07
Trav6-7-dv9A0A075B639 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.49■□□□□ 0.07
Trav6-7-dv9A0A075B639 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-7-dv9A0A075B639 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trav6-7-dv9A0A075B639 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-7-dv9A0A075B639 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-7-dv9A0A075B639 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6-7-dv9A0A075B639 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6-7-dv9A0A075B639 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6-7-dv9A0A075B639 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6-7-dv9A0A075B639 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6-7-dv9A0A075B639 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6-7-dv9A0A075B639 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6-7-dv9A0A075B639 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6-7-dv9A0A075B639 Gm11249-201ENSMUST00000117071 859 ntBASIC15.48■□□□□ 0.07
Trav6-7-dv9A0A075B639 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC15.48■□□□□ 0.07
Trav6-7-dv9A0A075B639 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6-7-dv9A0A075B639 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6-7-dv9A0A075B639 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6-7-dv9A0A075B639 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6-7-dv9A0A075B639 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Trav6-7-dv9A0A075B639 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Trav6-7-dv9A0A075B639 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.48■□□□□ 0.07
Trav6-7-dv9A0A075B639 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6-7-dv9A0A075B639 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6-7-dv9A0A075B639 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Trav6-7-dv9A0A075B639 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6-7-dv9A0A075B639 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Trav6-7-dv9A0A075B639 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6-7-dv9A0A075B639 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6-7-dv9A0A075B639 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
Trav6-7-dv9A0A075B639 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6-7-dv9A0A075B639 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6-7-dv9A0A075B639 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6-7-dv9A0A075B639 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
Trav6-7-dv9A0A075B639 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6-7-dv9A0A075B639 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
Trav6-7-dv9A0A075B639 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6-7-dv9A0A075B639 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Trav6-7-dv9A0A075B639 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC15.47■□□□□ 0.07
Trav6-7-dv9A0A075B639 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.47■□□□□ 0.07
Trav6-7-dv9A0A075B639 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6-7-dv9A0A075B639 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6-7-dv9A0A075B639 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6-7-dv9A0A075B639 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6-7-dv9A0A075B639 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6-7-dv9A0A075B639 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6-7-dv9A0A075B639 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6-7-dv9A0A075B639 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms