Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav1A0A075B5Z4 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav1A0A075B5Z4 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav1A0A075B5Z4 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Trav1A0A075B5Z4 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav1A0A075B5Z4 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav1A0A075B5Z4 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.25■□□□□ 0.19
Trav1A0A075B5Z4 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trav1A0A075B5Z4 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav1A0A075B5Z4 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav1A0A075B5Z4 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Trav1A0A075B5Z4 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Trav1A0A075B5Z4 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav1A0A075B5Z4 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Trav1A0A075B5Z4 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav1A0A075B5Z4 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Trav1A0A075B5Z4 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav1A0A075B5Z4 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav1A0A075B5Z4 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav1A0A075B5Z4 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav1A0A075B5Z4 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav1A0A075B5Z4 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.24■□□□□ 0.19
Trav1A0A075B5Z4 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.24■□□□□ 0.19
Trav1A0A075B5Z4 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav1A0A075B5Z4 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav1A0A075B5Z4 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trav1A0A075B5Z4 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav1A0A075B5Z4 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav1A0A075B5Z4 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
Trav1A0A075B5Z4 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.23■□□□□ 0.19
Trav1A0A075B5Z4 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav1A0A075B5Z4 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trav1A0A075B5Z4 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav1A0A075B5Z4 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.23■□□□□ 0.19
Trav1A0A075B5Z4 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.23■□□□□ 0.19
Trav1A0A075B5Z4 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Trav1A0A075B5Z4 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav1A0A075B5Z4 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.23■□□□□ 0.19
Trav1A0A075B5Z4 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav1A0A075B5Z4 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav1A0A075B5Z4 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav1A0A075B5Z4 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav1A0A075B5Z4 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav1A0A075B5Z4 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.23■□□□□ 0.19
Trav1A0A075B5Z4 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav1A0A075B5Z4 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trav1A0A075B5Z4 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav1A0A075B5Z4 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.23■□□□□ 0.19
Trav1A0A075B5Z4 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav1A0A075B5Z4 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav1A0A075B5Z4 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav1A0A075B5Z4 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav1A0A075B5Z4 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trav1A0A075B5Z4 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.22■□□□□ 0.19
Trav1A0A075B5Z4 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav1A0A075B5Z4 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav1A0A075B5Z4 Gm27275-201ENSMUST00000184318 272 ntBASIC16.22■□□□□ 0.19
Trav1A0A075B5Z4 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav1A0A075B5Z4 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav1A0A075B5Z4 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Trav1A0A075B5Z4 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav1A0A075B5Z4 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav1A0A075B5Z4 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav1A0A075B5Z4 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav1A0A075B5Z4 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav1A0A075B5Z4 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav1A0A075B5Z4 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav1A0A075B5Z4 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Trav1A0A075B5Z4 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trav1A0A075B5Z4 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav1A0A075B5Z4 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav1A0A075B5Z4 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav1A0A075B5Z4 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav1A0A075B5Z4 Gm15039-201ENSMUST00000118914 875 ntBASIC16.21■□□□□ 0.19
Trav1A0A075B5Z4 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.21■□□□□ 0.19
Trav1A0A075B5Z4 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.21■□□□□ 0.19
Trav1A0A075B5Z4 Gm18025-201ENSMUST00000221733 862 ntBASIC16.21■□□□□ 0.19
Trav1A0A075B5Z4 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav1A0A075B5Z4 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav1A0A075B5Z4 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav1A0A075B5Z4 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav1A0A075B5Z4 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav1A0A075B5Z4 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav1A0A075B5Z4 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav1A0A075B5Z4 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav1A0A075B5Z4 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav1A0A075B5Z4 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav1A0A075B5Z4 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Trav1A0A075B5Z4 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.2■□□□□ 0.18
Trav1A0A075B5Z4 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Trav1A0A075B5Z4 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav1A0A075B5Z4 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav1A0A075B5Z4 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav1A0A075B5Z4 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trav1A0A075B5Z4 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav1A0A075B5Z4 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav1A0A075B5Z4 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav1A0A075B5Z4 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav1A0A075B5Z4 Gm20049-201ENSMUST00000219950 730 ntBASIC16.2■□□□□ 0.18
Trav1A0A075B5Z4 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms