Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
Msx2Q03358 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Msx2Q03358 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC5.36□□□□□ -1.55
Msx2Q03358 Gm14163-201ENSMUST00000117342 217 ntBASIC5.36□□□□□ -1.55
Msx2Q03358 Gm13439-201ENSMUST00000117541 409 ntBASIC5.36□□□□□ -1.55
Msx2Q03358 Gm11826-201ENSMUST00000118781 438 ntBASIC5.36□□□□□ -1.55
Msx2Q03358 Gm11881-201ENSMUST00000119408 572 ntBASIC5.36□□□□□ -1.55
Msx2Q03358 Gm15480-201ENSMUST00000120442 519 ntBASIC5.36□□□□□ -1.55
Msx2Q03358 Gm14605-201ENSMUST00000120599 268 ntBASIC5.36□□□□□ -1.55
Msx2Q03358 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC5.36□□□□□ -1.55
Msx2Q03358 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC5.36□□□□□ -1.55
Msx2Q03358 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC5.36□□□□□ -1.55
Msx2Q03358 Gm16254-201ENSMUST00000131528 730 ntBASIC5.36□□□□□ -1.55
Msx2Q03358 Gm23332-201ENSMUST00000157424 275 ntBASIC5.36□□□□□ -1.55
Msx2Q03358 Gm24192-201ENSMUST00000157978 145 ntBASIC5.36□□□□□ -1.55
Msx2Q03358 Gm25013-201ENSMUST00000158402 128 ntBASIC5.36□□□□□ -1.55
Msx2Q03358 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC5.36□□□□□ -1.55
Msx2Q03358 Gm2619-202ENSMUST00000166777 651 ntBASIC5.36□□□□□ -1.55
Msx2Q03358 Gm23872-201ENSMUST00000175432 77 ntBASIC5.36□□□□□ -1.55
Msx2Q03358 Gm22852-201ENSMUST00000177899 101 ntBASIC5.36□□□□□ -1.55
Msx2Q03358 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Msx2Q03358 Gm26923-201ENSMUST00000182615 996 ntBASIC5.36□□□□□ -1.55
Msx2Q03358 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC5.36□□□□□ -1.55
Msx2Q03358 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Msx2Q03358 Gm17916-202ENSMUST00000187634 1187 ntBASIC5.36□□□□□ -1.55
Msx2Q03358 Gm29201-201ENSMUST00000189120 431 ntBASIC5.36□□□□□ -1.55
Msx2Q03358 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC5.36□□□□□ -1.55
Msx2Q03358 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC5.36□□□□□ -1.55
Msx2Q03358 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC5.36□□□□□ -1.55
Msx2Q03358 Gm8823-201ENSMUST00000193158 433 ntBASIC5.36□□□□□ -1.55
Msx2Q03358 Gm37616-201ENSMUST00000193974 322 ntBASIC5.36□□□□□ -1.55
Msx2Q03358 Gm8747-201ENSMUST00000195392 751 ntBASIC5.36□□□□□ -1.55
Msx2Q03358 Gm42522-201ENSMUST00000196071 255 ntBASIC5.36□□□□□ -1.55
Msx2Q03358 Mir6516-201ENSMUST00000196236 110 ntBASIC5.36□□□□□ -1.55
Msx2Q03358 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC5.36□□□□□ -1.55
Msx2Q03358 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC5.36□□□□□ -1.55
Msx2Q03358 Gm44041-201ENSMUST00000203678 396 ntBASIC5.36□□□□□ -1.55
Msx2Q03358 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Msx2Q03358 Gm7351-201ENSMUST00000210745 580 ntBASIC5.36□□□□□ -1.55
Msx2Q03358 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Msx2Q03358 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC5.36□□□□□ -1.55
Msx2Q03358 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC5.36□□□□□ -1.55
Msx2Q03358 AC124826.1-201ENSMUST00000221651 325 ntBASIC5.36□□□□□ -1.55
Msx2Q03358 Gm35558-203ENSMUST00000222264 204 ntBASIC5.36□□□□□ -1.55
Msx2Q03358 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC5.36□□□□□ -1.55
Msx2Q03358 AC154328.1-201ENSMUST00000225875 307 ntBASIC5.36□□□□□ -1.55
Msx2Q03358 AC139350.4-201ENSMUST00000228483 798 ntBASIC5.36□□□□□ -1.55
Msx2Q03358 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Msx2Q03358 Gm7646-201ENSMUST00000198590 1346 ntBASIC5.36□□□□□ -1.55
Msx2Q03358 AC159326.1-201ENSMUST00000219989 1302 ntBASIC5.36□□□□□ -1.55
Msx2Q03358 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Msx2Q03358 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Msx2Q03358 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Msx2Q03358 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Msx2Q03358 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Msx2Q03358 Cnga1-205ENSMUST00000201463 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Msx2Q03358 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
Msx2Q03358 Gm37606-201ENSMUST00000191816 3116 ntBASIC5.36□□□□□ -1.55
Msx2Q03358 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Msx2Q03358 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Msx2Q03358 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Msx2Q03358 Gm43201-201ENSMUST00000195925 3416 ntBASIC5.35□□□□□ -1.55
Msx2Q03358 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Msx2Q03358 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Msx2Q03358 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Msx2Q03358 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Msx2Q03358 Gm43924-201ENSMUST00000204851 1736 ntBASIC5.35□□□□□ -1.55
Msx2Q03358 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Msx2Q03358 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Msx2Q03358 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Msx2Q03358 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Msx2Q03358 Gm23431-201ENSMUST00000104006 107 ntBASIC5.35□□□□□ -1.55
Msx2Q03358 Gm23839-201ENSMUST00000116957 109 ntBASIC5.35□□□□□ -1.55
Msx2Q03358 Gm13866-201ENSMUST00000118901 968 ntBASIC5.35□□□□□ -1.55
Msx2Q03358 Gm14018-201ENSMUST00000119042 455 ntBASIC5.35□□□□□ -1.55
Msx2Q03358 Gm12281-201ENSMUST00000119536 298 ntBASIC5.35□□□□□ -1.55
Msx2Q03358 Gm14831-201ENSMUST00000120253 409 ntBASIC5.35□□□□□ -1.55
Msx2Q03358 Gm16100-201ENSMUST00000120489 231 ntBASIC5.35□□□□□ -1.55
Msx2Q03358 Gm7931-201ENSMUST00000121537 271 ntBASIC5.35□□□□□ -1.55
Msx2Q03358 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC5.35□□□□□ -1.55
Msx2Q03358 Gm22208-201ENSMUST00000122658 110 ntBASIC5.35□□□□□ -1.55
Msx2Q03358 Gm25291-201ENSMUST00000122795 144 ntBASIC5.35□□□□□ -1.55
Msx2Q03358 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC5.35□□□□□ -1.55
Msx2Q03358 Gm16298-201ENSMUST00000161107 420 ntBASIC5.35□□□□□ -1.55
Msx2Q03358 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Msx2Q03358 Gm3084-201ENSMUST00000169967 598 ntBASIC5.35□□□□□ -1.55
Msx2Q03358 Gm22951-201ENSMUST00000179471 107 ntBASIC5.35□□□□□ -1.55
Msx2Q03358 Mir6238-201ENSMUST00000184140 129 ntBASIC5.35□□□□□ -1.55
Msx2Q03358 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Msx2Q03358 Gm37375-201ENSMUST00000193859 387 ntBASIC5.35□□□□□ -1.55
Msx2Q03358 Gm37385-201ENSMUST00000195223 387 ntBASIC5.35□□□□□ -1.55
Msx2Q03358 Gm9317-201ENSMUST00000197055 862 ntBASIC5.35□□□□□ -1.55
Msx2Q03358 Gm43541-201ENSMUST00000197208 581 ntBASIC5.35□□□□□ -1.55
Msx2Q03358 Gm5551-201ENSMUST00000199720 690 ntBASIC5.35□□□□□ -1.55
Msx2Q03358 Gm43798-201ENSMUST00000202056 394 ntBASIC5.35□□□□□ -1.55
Msx2Q03358 Gm2676-201ENSMUST00000207279 606 ntBASIC5.35□□□□□ -1.55
Msx2Q03358 Gm19900-201ENSMUST00000207285 576 ntBASIC5.35□□□□□ -1.55
Msx2Q03358 AC162387.1-201ENSMUST00000213369 213 ntBASIC5.35□□□□□ -1.55
Msx2Q03358 AC162931.1-201ENSMUST00000214184 267 ntBASIC5.35□□□□□ -1.55
Msx2Q03358 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms