Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
Brf1Q8CFK2 AC102847.2-201ENSMUST00000227799 2906 ntBASIC5.65□□□□□ -1.5
Brf1Q8CFK2 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Brf1Q8CFK2 Gm5925-201ENSMUST00000105016 1497 ntBASIC5.65□□□□□ -1.5
Brf1Q8CFK2 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Brf1Q8CFK2 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Brf1Q8CFK2 Gm37628-201ENSMUST00000194644 5440 ntBASIC5.65□□□□□ -1.5
Brf1Q8CFK2 AC126439.1-201ENSMUST00000226772 2104 ntBASIC5.65□□□□□ -1.5
Brf1Q8CFK2 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.5
Brf1Q8CFK2 Gm37764-201ENSMUST00000194664 2150 ntBASIC5.65□□□□□ -1.5
Brf1Q8CFK2 Gm45149-201ENSMUST00000206459 2172 ntBASIC5.65□□□□□ -1.5
Brf1Q8CFK2 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Brf1Q8CFK2 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Brf1Q8CFK2 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC5.65□□□□□ -1.5
Brf1Q8CFK2 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Brf1Q8CFK2 Gm23879-201ENSMUST00000116874 126 ntBASIC5.65□□□□□ -1.5
Brf1Q8CFK2 Gm14909-201ENSMUST00000117853 351 ntBASIC5.65□□□□□ -1.5
Brf1Q8CFK2 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC5.65□□□□□ -1.5
Brf1Q8CFK2 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC5.65□□□□□ -1.5
Brf1Q8CFK2 Gm13508-201ENSMUST00000121639 775 ntBASIC5.65□□□□□ -1.5
Brf1Q8CFK2 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Brf1Q8CFK2 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC5.65□□□□□ -1.5
Brf1Q8CFK2 Magea9-ps-201ENSMUST00000140655 732 ntBASIC5.65□□□□□ -1.5
Brf1Q8CFK2 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Brf1Q8CFK2 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Brf1Q8CFK2 Gm22819-201ENSMUST00000157445 303 ntBASIC5.65□□□□□ -1.5
Brf1Q8CFK2 Gm23754-201ENSMUST00000157576 63 ntBASIC5.65□□□□□ -1.5
Brf1Q8CFK2 Gm26310-201ENSMUST00000157766 117 ntBASIC5.65□□□□□ -1.5
Brf1Q8CFK2 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Brf1Q8CFK2 Magea9-ps-202ENSMUST00000167328 899 ntBASIC5.65□□□□□ -1.5
Brf1Q8CFK2 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC5.65□□□□□ -1.5
Brf1Q8CFK2 Gm21809-201ENSMUST00000178495 468 ntBASIC5.65□□□□□ -1.5
Brf1Q8CFK2 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Brf1Q8CFK2 Gm17412-201ENSMUST00000179261 468 ntBASIC5.65□□□□□ -1.5
Brf1Q8CFK2 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Brf1Q8CFK2 Mir7006-201ENSMUST00000183624 69 ntBASIC5.65□□□□□ -1.5
Brf1Q8CFK2 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC5.65□□□□□ -1.5
Brf1Q8CFK2 Gm9687-201ENSMUST00000189312 602 ntBASIC5.65□□□□□ -1.5
Brf1Q8CFK2 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC5.65□□□□□ -1.5
Brf1Q8CFK2 Gm37961-201ENSMUST00000192729 299 ntBASIC5.65□□□□□ -1.5
Brf1Q8CFK2 Gm37979-201ENSMUST00000193065 712 ntBASIC5.65□□□□□ -1.5
Brf1Q8CFK2 Gm43237-201ENSMUST00000196835 1044 ntBASIC5.65□□□□□ -1.5
Brf1Q8CFK2 Gm42502-201ENSMUST00000198550 1089 ntBASIC5.65□□□□□ -1.5
Brf1Q8CFK2 Gm9560-201ENSMUST00000205012 1201 ntBASIC5.65□□□□□ -1.5
Brf1Q8CFK2 Gm19761-201ENSMUST00000205372 391 ntBASIC5.65□□□□□ -1.5
Brf1Q8CFK2 AC117814.1-201ENSMUST00000226135 352 ntBASIC5.65□□□□□ -1.5
Brf1Q8CFK2 CT025548.1-201ENSMUST00000227459 257 ntBASIC5.65□□□□□ -1.5
Brf1Q8CFK2 AC155314.1-201ENSMUST00000227624 508 ntBASIC5.65□□□□□ -1.5
Brf1Q8CFK2 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Brf1Q8CFK2 n-R5s152-201ENSMUST00000093641 119 ntBASIC5.65□□□□□ -1.5
Brf1Q8CFK2 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
Brf1Q8CFK2 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC5.65□□□□□ -1.5
Brf1Q8CFK2 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Brf1Q8CFK2 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Brf1Q8CFK2 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Brf1Q8CFK2 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Brf1Q8CFK2 Gm42704-201ENSMUST00000196875 1778 ntBASIC5.65□□□□□ -1.51
Brf1Q8CFK2 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Brf1Q8CFK2 AC133076.2-201ENSMUST00000227678 3532 ntBASIC5.64□□□□□ -1.51
Brf1Q8CFK2 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Brf1Q8CFK2 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
Brf1Q8CFK2 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Brf1Q8CFK2 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC5.64□□□□□ -1.51
Brf1Q8CFK2 Gm44587-201ENSMUST00000207399 1685 ntBASIC5.64□□□□□ -1.51
Brf1Q8CFK2 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Brf1Q8CFK2 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Brf1Q8CFK2 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC5.64□□□□□ -1.51
Brf1Q8CFK2 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Brf1Q8CFK2 Gm14163-201ENSMUST00000117342 217 ntBASIC5.64□□□□□ -1.51
Brf1Q8CFK2 Gm15785-201ENSMUST00000119145 694 ntBASIC5.64□□□□□ -1.51
Brf1Q8CFK2 Gm22958-201ENSMUST00000122512 184 ntBASIC5.64□□□□□ -1.51
Brf1Q8CFK2 Gm5924-201ENSMUST00000132554 871 ntBASIC5.64□□□□□ -1.51
Brf1Q8CFK2 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Brf1Q8CFK2 Gm15905-201ENSMUST00000137042 298 ntBASIC5.64□□□□□ -1.51
Brf1Q8CFK2 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC5.64□□□□□ -1.51
Brf1Q8CFK2 Gm2892-201ENSMUST00000145537 711 ntBASIC5.64□□□□□ -1.51
Brf1Q8CFK2 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Brf1Q8CFK2 Gm22601-201ENSMUST00000157595 250 ntBASIC5.64□□□□□ -1.51
Brf1Q8CFK2 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Brf1Q8CFK2 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Brf1Q8CFK2 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Brf1Q8CFK2 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Brf1Q8CFK2 Gm37837-201ENSMUST00000191743 604 ntBASIC5.64□□□□□ -1.51
Brf1Q8CFK2 Gm8069-201ENSMUST00000197887 154 ntBASIC5.64□□□□□ -1.51
Brf1Q8CFK2 Gm43309-201ENSMUST00000200837 458 ntBASIC5.64□□□□□ -1.51
Brf1Q8CFK2 Gm44779-201ENSMUST00000206937 708 ntBASIC5.64□□□□□ -1.51
Brf1Q8CFK2 Gm18258-201ENSMUST00000210413 542 ntBASIC5.64□□□□□ -1.51
Brf1Q8CFK2 Gm45409-201ENSMUST00000211486 252 ntBASIC5.64□□□□□ -1.51
Brf1Q8CFK2 AC164567.4-201ENSMUST00000219708 483 ntBASIC5.64□□□□□ -1.51
Brf1Q8CFK2 Gm6171-201ENSMUST00000220760 645 ntBASIC5.64□□□□□ -1.51
Brf1Q8CFK2 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC5.64□□□□□ -1.51
Brf1Q8CFK2 AC131745.1-201ENSMUST00000223660 330 ntBASIC5.64□□□□□ -1.51
Brf1Q8CFK2 AC124549.1-201ENSMUST00000225912 333 ntBASIC5.64□□□□□ -1.51
Brf1Q8CFK2 n-R5s167-201ENSMUST00000083227 121 ntBASIC5.64□□□□□ -1.51
Brf1Q8CFK2 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC5.64□□□□□ -1.51
Brf1Q8CFK2 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Brf1Q8CFK2 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Brf1Q8CFK2 Gm7451-201ENSMUST00000208382 1392 ntBASIC5.64□□□□□ -1.51
Brf1Q8CFK2 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
Brf1Q8CFK2 Olfr310-202ENSMUST00000217724 1400 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms