Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Gabpb1Q00420 Vmn1r80-201ENSMUST00000075053 927 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Gabpb1Q00420 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Gabpb1Q00420 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Gabpb1Q00420 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
Gabpb1Q00420 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC4.4□□□□□ -1.71
Gabpb1Q00420 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Gabpb1Q00420 Gm45235-201ENSMUST00000208016 4465 ntBASIC4.4□□□□□ -1.71
Gabpb1Q00420 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Gabpb1Q00420 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Gabpb1Q00420 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Gabpb1Q00420 Gm44283-201ENSMUST00000204461 3950 ntBASIC4.39□□□□□ -1.71
Gabpb1Q00420 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Gabpb1Q00420 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Gabpb1Q00420 AC159476.1-201ENSMUST00000215914 1668 ntBASIC4.39□□□□□ -1.71
Gabpb1Q00420 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Gabpb1Q00420 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Gabpb1Q00420 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Gabpb1Q00420 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Gabpb1Q00420 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Gabpb1Q00420 Gm24469-201ENSMUST00000104487 131 ntBASIC4.39□□□□□ -1.71
Gabpb1Q00420 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC4.39□□□□□ -1.71
Gabpb1Q00420 Gm13080-201ENSMUST00000120556 420 ntBASIC4.39□□□□□ -1.71
Gabpb1Q00420 Gm8200-201ENSMUST00000122390 222 ntBASIC4.39□□□□□ -1.71
Gabpb1Q00420 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Gabpb1Q00420 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC4.39□□□□□ -1.71
Gabpb1Q00420 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Gabpb1Q00420 Gm23906-201ENSMUST00000157573 128 ntBASIC4.39□□□□□ -1.71
Gabpb1Q00420 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Gabpb1Q00420 Gm17060-201ENSMUST00000172394 824 ntBASIC4.39□□□□□ -1.71
Gabpb1Q00420 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Gabpb1Q00420 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Gabpb1Q00420 Gm4842-201ENSMUST00000183237 835 ntBASIC4.39□□□□□ -1.71
Gabpb1Q00420 Gm27564-201ENSMUST00000185196 96 ntBASIC4.39□□□□□ -1.71
Gabpb1Q00420 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC4.39□□□□□ -1.71
Gabpb1Q00420 Gm28190-201ENSMUST00000189766 722 ntBASIC4.39□□□□□ -1.71
Gabpb1Q00420 Gm28639-201ENSMUST00000191519 481 ntBASIC4.39□□□□□ -1.71
Gabpb1Q00420 Gm37167-201ENSMUST00000194946 396 ntBASIC4.39□□□□□ -1.71
Gabpb1Q00420 Gm36954-201ENSMUST00000195362 363 ntBASIC4.39□□□□□ -1.71
Gabpb1Q00420 Gm44088-201ENSMUST00000204595 237 ntBASIC4.39□□□□□ -1.71
Gabpb1Q00420 Gm45228-201ENSMUST00000206585 352 ntBASIC4.39□□□□□ -1.71
Gabpb1Q00420 Gm18855-201ENSMUST00000206689 570 ntBASIC4.39□□□□□ -1.71
Gabpb1Q00420 Gm45200-201ENSMUST00000207434 919 ntBASIC4.39□□□□□ -1.71
Gabpb1Q00420 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC4.39□□□□□ -1.71
Gabpb1Q00420 Olfr790-204ENSMUST00000218901 1070 ntBASIC4.39□□□□□ -1.71
Gabpb1Q00420 AC154626.1-201ENSMUST00000226070 311 ntBASIC4.39□□□□□ -1.71
Gabpb1Q00420 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC4.39□□□□□ -1.71
Gabpb1Q00420 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Gabpb1Q00420 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Gabpb1Q00420 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Gabpb1Q00420 Gm26437-201ENSMUST00000082595 105 ntBASIC4.39□□□□□ -1.71
Gabpb1Q00420 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
Gabpb1Q00420 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Gabpb1Q00420 Gm17752-201ENSMUST00000185787 3726 ntBASIC4.39□□□□□ -1.71
Gabpb1Q00420 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Gabpb1Q00420 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Gabpb1Q00420 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC4.39□□□□□ -1.71
Gabpb1Q00420 Gm42986-201ENSMUST00000201618 3385 ntBASIC4.39□□□□□ -1.71
Gabpb1Q00420 Gm45211-201ENSMUST00000206208 2650 ntBASIC4.39□□□□□ -1.71
Gabpb1Q00420 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Gabpb1Q00420 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
Gabpb1Q00420 Gm37195-201ENSMUST00000192006 3018 ntBASIC4.38□□□□□ -1.71
Gabpb1Q00420 Gm6300-201ENSMUST00000192393 1498 ntBASIC4.38□□□□□ -1.71
Gabpb1Q00420 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Gabpb1Q00420 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Gabpb1Q00420 Gm15021-201ENSMUST00000117832 742 ntBASIC4.38□□□□□ -1.71
Gabpb1Q00420 Gm11890-201ENSMUST00000119585 417 ntBASIC4.38□□□□□ -1.71
Gabpb1Q00420 Gm12379-201ENSMUST00000119607 391 ntBASIC4.38□□□□□ -1.71
Gabpb1Q00420 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC4.38□□□□□ -1.71
Gabpb1Q00420 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
Gabpb1Q00420 Gm24773-201ENSMUST00000158513 99 ntBASIC4.38□□□□□ -1.71
Gabpb1Q00420 Gm17421-201ENSMUST00000167845 674 ntBASIC4.38□□□□□ -1.71
Gabpb1Q00420 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC4.38□□□□□ -1.71
Gabpb1Q00420 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Gabpb1Q00420 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Gabpb1Q00420 Gm25598-201ENSMUST00000179031 107 ntBASIC4.38□□□□□ -1.71
Gabpb1Q00420 Gm27805-201ENSMUST00000184513 79 ntBASIC4.38□□□□□ -1.71
Gabpb1Q00420 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
Gabpb1Q00420 Gm5660-201ENSMUST00000197453 1149 ntBASIC4.38□□□□□ -1.71
Gabpb1Q00420 Gm36382-201ENSMUST00000198892 541 ntBASIC4.38□□□□□ -1.71
Gabpb1Q00420 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC4.38□□□□□ -1.71
Gabpb1Q00420 Gm4734-201ENSMUST00000200117 777 ntBASIC4.38□□□□□ -1.71
Gabpb1Q00420 Gm33626-201ENSMUST00000206790 828 ntBASIC4.38□□□□□ -1.71
Gabpb1Q00420 Gm44946-201ENSMUST00000208425 572 ntBASIC4.38□□□□□ -1.71
Gabpb1Q00420 Olfr367-ps-203ENSMUST00000213819 541 ntTSL 3 BASIC4.38□□□□□ -1.71
Gabpb1Q00420 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC4.38□□□□□ -1.71
Gabpb1Q00420 AC153526.4-201ENSMUST00000217713 379 ntBASIC4.38□□□□□ -1.71
Gabpb1Q00420 AC130536.1-201ENSMUST00000224425 271 ntBASIC4.38□□□□□ -1.71
Gabpb1Q00420 AC158955.1-201ENSMUST00000227140 385 ntBASIC4.38□□□□□ -1.71
Gabpb1Q00420 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Gabpb1Q00420 Gm7204-201ENSMUST00000062591 600 ntBASIC4.38□□□□□ -1.71
Gabpb1Q00420 n-R5s162-201ENSMUST00000082581 119 ntBASIC4.38□□□□□ -1.71
Gabpb1Q00420 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC4.38□□□□□ -1.71
Gabpb1Q00420 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Gabpb1Q00420 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Gabpb1Q00420 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC4.38□□□□□ -1.71
Gabpb1Q00420 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Gabpb1Q00420 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Gabpb1Q00420 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Gabpb1Q00420 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 90.6 ms