Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm25665-201ENSMUST00000157695 110 ntBASIC5.91□□□□□ -1.46
Sox1P53783 Gm26352-201ENSMUST00000158223 125 ntBASIC5.91□□□□□ -1.46
Sox1P53783 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sox1P53783 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Sox1P53783 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC5.91□□□□□ -1.46
Sox1P53783 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Sox1P53783 Mir7012-201ENSMUST00000183900 64 ntBASIC5.91□□□□□ -1.46
Sox1P53783 Gm27640-201ENSMUST00000184580 147 ntBASIC5.91□□□□□ -1.46
Sox1P53783 Gm28146-201ENSMUST00000185517 701 ntBASIC5.91□□□□□ -1.46
Sox1P53783 Gm28574-201ENSMUST00000185757 699 ntBASIC5.91□□□□□ -1.46
Sox1P53783 Gm29556-201ENSMUST00000187591 696 ntBASIC5.91□□□□□ -1.46
Sox1P53783 Gm28397-201ENSMUST00000187970 699 ntBASIC5.91□□□□□ -1.46
Sox1P53783 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC5.91□□□□□ -1.46
Sox1P53783 Gm29366-201ENSMUST00000190481 699 ntBASIC5.91□□□□□ -1.46
Sox1P53783 Gm38224-201ENSMUST00000191648 2100 ntBASIC5.91□□□□□ -1.46
Sox1P53783 Gm37511-201ENSMUST00000192901 294 ntBASIC5.91□□□□□ -1.46
Sox1P53783 Gm6510-201ENSMUST00000195916 574 ntBASIC5.91□□□□□ -1.46
Sox1P53783 Gm45209-201ENSMUST00000207122 353 ntBASIC5.91□□□□□ -1.46
Sox1P53783 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Sox1P53783 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC5.91□□□□□ -1.46
Sox1P53783 AC137127.3-201ENSMUST00000213340 349 ntBASIC5.91□□□□□ -1.46
Sox1P53783 Gm18703-201ENSMUST00000215318 333 ntBASIC5.91□□□□□ -1.46
Sox1P53783 AC121978.1-201ENSMUST00000228357 380 ntBASIC5.91□□□□□ -1.46
Sox1P53783 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC5.91□□□□□ -1.46
Sox1P53783 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sox1P53783 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sox1P53783 Gm8412-201ENSMUST00000077493 440 ntBASIC5.91□□□□□ -1.46
Sox1P53783 Snord38a-201ENSMUST00000083746 71 ntBASIC5.91□□□□□ -1.46
Sox1P53783 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC5.91□□□□□ -1.46
Sox1P53783 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Sox1P53783 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sox1P53783 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Sox1P53783 Gm29293-201ENSMUST00000189416 2188 ntBASIC5.91□□□□□ -1.46
Sox1P53783 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Sox1P53783 Gm37776-201ENSMUST00000193471 2497 ntBASIC5.91□□□□□ -1.46
Sox1P53783 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sox1P53783 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sox1P53783 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Sox1P53783 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Sox1P53783 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Sox1P53783 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sox1P53783 Gm15170-201ENSMUST00000121593 2023 ntBASIC5.91□□□□□ -1.46
Sox1P53783 Gm45520-201ENSMUST00000210109 2031 ntBASIC5.91□□□□□ -1.46
Sox1P53783 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Sox1P53783 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sox1P53783 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Sox1P53783 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC5.9□□□□□ -1.46
Sox1P53783 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Sox1P53783 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Sox1P53783 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Sox1P53783 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.46
Sox1P53783 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Sox1P53783 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Sox1P53783 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC5.9□□□□□ -1.46
Sox1P53783 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Sox1P53783 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
Sox1P53783 Gm44675-201ENSMUST00000208188 2927 ntBASIC5.9□□□□□ -1.46
Sox1P53783 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Sox1P53783 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Sox1P53783 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
Sox1P53783 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Sox1P53783 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Sox1P53783 Gm26396-201ENSMUST00000104093 132 ntBASIC5.9□□□□□ -1.46
Sox1P53783 Gm9059-201ENSMUST00000118319 183 ntBASIC5.9□□□□□ -1.46
Sox1P53783 Gm12803-201ENSMUST00000118907 821 ntBASIC5.9□□□□□ -1.46
Sox1P53783 Gm11825-201ENSMUST00000120710 736 ntBASIC5.9□□□□□ -1.46
Sox1P53783 Gm12466-201ENSMUST00000121199 620 ntBASIC5.9□□□□□ -1.46
Sox1P53783 Gm12340-201ENSMUST00000121617 462 ntBASIC5.9□□□□□ -1.46
Sox1P53783 Gm12095-201ENSMUST00000121962 816 ntBASIC5.9□□□□□ -1.46
Sox1P53783 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Sox1P53783 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC5.9□□□□□ -1.46
Sox1P53783 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Sox1P53783 Gm17421-201ENSMUST00000167845 674 ntBASIC5.9□□□□□ -1.46
Sox1P53783 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC5.9□□□□□ -1.46
Sox1P53783 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Sox1P53783 Gm23945-201ENSMUST00000179609 92 ntBASIC5.9□□□□□ -1.46
Sox1P53783 Gm27834-201ENSMUST00000183427 125 ntBASIC5.9□□□□□ -1.46
Sox1P53783 Gm38234-201ENSMUST00000195204 421 ntBASIC5.9□□□□□ -1.46
Sox1P53783 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Sox1P53783 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Sox1P53783 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Sox1P53783 Gm44295-201ENSMUST00000203805 437 ntBASIC5.9□□□□□ -1.46
Sox1P53783 Gm44472-201ENSMUST00000204922 943 ntBASIC5.9□□□□□ -1.46
Sox1P53783 Gm44002-201ENSMUST00000205134 594 ntBASIC5.9□□□□□ -1.46
Sox1P53783 Gm45049-201ENSMUST00000207586 591 ntBASIC5.9□□□□□ -1.46
Sox1P53783 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC5.9□□□□□ -1.46
Sox1P53783 Gm45375-201ENSMUST00000210338 280 ntBASIC5.9□□□□□ -1.46
Sox1P53783 Gm45857-201ENSMUST00000212207 356 ntBASIC5.9□□□□□ -1.46
Sox1P53783 Gm7692-201ENSMUST00000213534 409 ntBASIC5.9□□□□□ -1.46
Sox1P53783 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC5.9□□□□□ -1.46
Sox1P53783 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC5.9□□□□□ -1.46
Sox1P53783 AC167192.2-201ENSMUST00000224794 198 ntBASIC5.9□□□□□ -1.46
Sox1P53783 AC183096.1-201ENSMUST00000226392 130 ntBASIC5.9□□□□□ -1.46
Sox1P53783 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Sox1P53783 Gm25410-201ENSMUST00000083758 137 ntBASIC5.9□□□□□ -1.46
Sox1P53783 Gm22365-201ENSMUST00000093750 117 ntBASIC5.9□□□□□ -1.46
Sox1P53783 AC132852.2-201ENSMUST00000216052 2794 ntBASIC5.9□□□□□ -1.47
Sox1P53783 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
Sox1P53783 AC159326.1-201ENSMUST00000219989 1302 ntBASIC5.9□□□□□ -1.47
Sox1P53783 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 99 ms