Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Sox9Q04887 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Sox9Q04887 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Sox9Q04887 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
Sox9Q04887 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Sox9Q04887 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
Sox9Q04887 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Sox9Q04887 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Sox9Q04887 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Sox9Q04887 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Sox9Q04887 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC5.57□□□□□ -1.52
Sox9Q04887 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Sox9Q04887 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Sox9Q04887 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Sox9Q04887 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
Sox9Q04887 AC158779.2-201ENSMUST00000227902 1947 ntBASIC5.56□□□□□ -1.52
Sox9Q04887 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Sox9Q04887 Gm44822-201ENSMUST00000208559 6389 ntBASIC5.56□□□□□ -1.52
Sox9Q04887 AC164092.3-201ENSMUST00000216970 1323 ntBASIC5.56□□□□□ -1.52
Sox9Q04887 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Sox9Q04887 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC5.56□□□□□ -1.52
Sox9Q04887 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Sox9Q04887 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Sox9Q04887 Gm43831-201ENSMUST00000200461 2598 ntBASIC5.56□□□□□ -1.52
Sox9Q04887 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Sox9Q04887 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC5.56□□□□□ -1.52
Sox9Q04887 Gm26002-201ENSMUST00000101915 107 ntBASIC5.56□□□□□ -1.52
Sox9Q04887 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Sox9Q04887 Snord66-201ENSMUST00000104051 75 ntBASIC5.56□□□□□ -1.52
Sox9Q04887 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Sox9Q04887 Gm15076-201ENSMUST00000117076 474 ntBASIC5.56□□□□□ -1.52
Sox9Q04887 Gm14293-201ENSMUST00000118528 577 ntBASIC5.56□□□□□ -1.52
Sox9Q04887 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC5.56□□□□□ -1.52
Sox9Q04887 Gm13593-201ENSMUST00000121329 692 ntBASIC5.56□□□□□ -1.52
Sox9Q04887 Gm25292-201ENSMUST00000122797 322 ntBASIC5.56□□□□□ -1.52
Sox9Q04887 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC5.56□□□□□ -1.52
Sox9Q04887 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC5.56□□□□□ -1.52
Sox9Q04887 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC5.56□□□□□ -1.52
Sox9Q04887 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Sox9Q04887 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC5.56□□□□□ -1.52
Sox9Q04887 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
Sox9Q04887 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC5.56□□□□□ -1.52
Sox9Q04887 Gm26085-201ENSMUST00000157900 116 ntBASIC5.56□□□□□ -1.52
Sox9Q04887 Gm24217-201ENSMUST00000158260 133 ntBASIC5.56□□□□□ -1.52
Sox9Q04887 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Sox9Q04887 Gm5929-201ENSMUST00000166883 487 ntBASIC5.56□□□□□ -1.52
Sox9Q04887 Mir3473f-201ENSMUST00000183743 136 ntBASIC5.56□□□□□ -1.52
Sox9Q04887 Gm27428-201ENSMUST00000184289 110 ntBASIC5.56□□□□□ -1.52
Sox9Q04887 Mir6391-201ENSMUST00000184391 104 ntBASIC5.56□□□□□ -1.52
Sox9Q04887 Gm27611-201ENSMUST00000184690 108 ntBASIC5.56□□□□□ -1.52
Sox9Q04887 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Sox9Q04887 Gm5058-201ENSMUST00000187331 463 ntBASIC5.56□□□□□ -1.52
Sox9Q04887 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC5.56□□□□□ -1.52
Sox9Q04887 Gm29475-201ENSMUST00000190767 312 ntBASIC5.56□□□□□ -1.52
Sox9Q04887 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC5.56□□□□□ -1.52
Sox9Q04887 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC5.56□□□□□ -1.52
Sox9Q04887 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Sox9Q04887 Trav3-2-201ENSMUST00000198999 305 ntBASIC5.56□□□□□ -1.52
Sox9Q04887 Gm18452-201ENSMUST00000202968 1111 ntBASIC5.56□□□□□ -1.52
Sox9Q04887 Gm44254-201ENSMUST00000204184 322 ntBASIC5.56□□□□□ -1.52
Sox9Q04887 AC134333.1-201ENSMUST00000204536 944 ntBASIC5.56□□□□□ -1.52
Sox9Q04887 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC5.56□□□□□ -1.52
Sox9Q04887 Gm45226-201ENSMUST00000206602 288 ntBASIC5.56□□□□□ -1.52
Sox9Q04887 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC5.56□□□□□ -1.52
Sox9Q04887 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC5.56□□□□□ -1.52
Sox9Q04887 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Sox9Q04887 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Sox9Q04887 AC164116.1-201ENSMUST00000225810 622 ntBASIC5.56□□□□□ -1.52
Sox9Q04887 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Sox9Q04887 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Sox9Q04887 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
Sox9Q04887 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Sox9Q04887 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Sox9Q04887 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Sox9Q04887 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC5.56□□□□□ -1.52
Sox9Q04887 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Sox9Q04887 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC5.56□□□□□ -1.52
Sox9Q04887 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Sox9Q04887 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Sox9Q04887 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC5.56□□□□□ -1.52
Sox9Q04887 Gm15583-201ENSMUST00000116191 3510 ntBASIC5.56□□□□□ -1.52
Sox9Q04887 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Sox9Q04887 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Sox9Q04887 Olfr328-203ENSMUST00000215717 2793 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Sox9Q04887 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sox9Q04887 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC5.55□□□□□ -1.52
Sox9Q04887 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
Sox9Q04887 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Sox9Q04887 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Sox9Q04887 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Sox9Q04887 Gm18954-201ENSMUST00000222200 1792 ntBASIC5.55□□□□□ -1.52
Sox9Q04887 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC5.55□□□□□ -1.52
Sox9Q04887 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Sox9Q04887 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Sox9Q04887 Gm22771-201ENSMUST00000104449 91 ntBASIC5.55□□□□□ -1.52
Sox9Q04887 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Sox9Q04887 Gm15312-201ENSMUST00000118827 271 ntBASIC5.55□□□□□ -1.52
Sox9Q04887 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Sox9Q04887 Gm11876-201ENSMUST00000120002 269 ntBASIC5.55□□□□□ -1.52
Sox9Q04887 Gm11410-201ENSMUST00000120053 1143 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 92.5 ms