Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm20304-201ENSMUST00000218168 444 ntBASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 AC151904.3-201ENSMUST00000219266 895 ntBASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 AC155941.1-201ENSMUST00000220223 529 ntBASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 AC239878.2-201ENSMUST00000224048 464 ntBASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 AC141884.1-201ENSMUST00000226327 636 ntBASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Gm26064-201ENSMUST00000083381 109 ntBASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Gm24928-201ENSMUST00000083399 107 ntBASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Gm25897-201ENSMUST00000083709 107 ntBASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Gm6990-201ENSMUST00000086830 348 ntBASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 AC147639.2-202ENSMUST00000224834 1545 ntBASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 8430419K02Rik-201ENSMUST00000128654 1870 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Gm42686-201ENSMUST00000199172 4108 ntBASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Gm44708-201ENSMUST00000205580 2237 ntBASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Gm9077-201ENSMUST00000210657 2298 ntBASIC5.11□□□□□ -1.59
Pcdh1F7BJK1 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 Gm23311-201ENSMUST00000104152 134 ntBASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 Gm14867-201ENSMUST00000120156 866 ntBASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 Gm15237-201ENSMUST00000122104 469 ntBASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 Gm22916-201ENSMUST00000157616 119 ntBASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 Gm24418-201ENSMUST00000177597 79 ntBASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 Gm24639-201ENSMUST00000178518 79 ntBASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 Gm24897-201ENSMUST00000179033 107 ntBASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 Gm23076-201ENSMUST00000179082 79 ntBASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 Gm25077-201ENSMUST00000179157 79 ntBASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 Mir6412-201ENSMUST00000184477 97 ntBASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 Gm29490-201ENSMUST00000190923 342 ntBASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 Gm3351-201ENSMUST00000193454 505 ntBASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 Gm43762-201ENSMUST00000201521 295 ntBASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 Gm42728-201ENSMUST00000202644 1552 ntBASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 Gm17780-201ENSMUST00000207142 612 ntBASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 Gm45530-201ENSMUST00000211658 225 ntBASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 AC124556.1-201ENSMUST00000218256 1319 ntBASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 AC139754.3-201ENSMUST00000220444 1627 ntBASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 AC140930.1-201ENSMUST00000221889 389 ntBASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 Gm5457-201ENSMUST00000022260 333 ntBASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 Gm5653-201ENSMUST00000223393 1337 ntBASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 CT009733.2-202ENSMUST00000224171 4748 ntBASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Pcdh1F7BJK1 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 Gm43567-201ENSMUST00000197581 1978 ntBASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 AC162910.1-201ENSMUST00000221219 1723 ntBASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 Gm11908-201ENSMUST00000117755 347 ntBASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 Gm15399-201ENSMUST00000118055 724 ntBASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 Gm14783-201ENSMUST00000118900 663 ntBASIC5.09□□□□□ -1.59
Pcdh1F7BJK1 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms