Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 CT030662.1-201ENSMUST00000227380 232 ntBASIC5.46□□□□□ -1.54
Syne3Q4FZC9 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
Syne3Q4FZC9 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Syne3Q4FZC9 Gm10356-201ENSMUST00000097152 1258 ntBASIC5.46□□□□□ -1.54
Syne3Q4FZC9 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Syne3Q4FZC9 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Syne3Q4FZC9 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Syne3Q4FZC9 Gm20667-201ENSMUST00000175674 1930 ntBASIC5.46□□□□□ -1.54
Syne3Q4FZC9 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
Syne3Q4FZC9 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
Syne3Q4FZC9 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
Syne3Q4FZC9 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.54
Syne3Q4FZC9 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Syne3Q4FZC9 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
Syne3Q4FZC9 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Syne3Q4FZC9 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Syne3Q4FZC9 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Syne3Q4FZC9 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC5.45□□□□□ -1.54
Syne3Q4FZC9 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC5.45□□□□□ -1.54
Syne3Q4FZC9 AC115970.1-201ENSMUST00000218910 1758 ntBASIC5.45□□□□□ -1.54
Syne3Q4FZC9 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Syne3Q4FZC9 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Syne3Q4FZC9 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC5.45□□□□□ -1.54
Syne3Q4FZC9 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Syne3Q4FZC9 AC154227.1-201ENSMUST00000228809 2467 ntBASIC5.45□□□□□ -1.54
Syne3Q4FZC9 Gm24170-201ENSMUST00000104124 133 ntBASIC5.45□□□□□ -1.54
Syne3Q4FZC9 Gm25919-201ENSMUST00000104271 132 ntBASIC5.45□□□□□ -1.54
Syne3Q4FZC9 Gm13890-201ENSMUST00000117578 390 ntBASIC5.45□□□□□ -1.54
Syne3Q4FZC9 Gm7312-201ENSMUST00000118798 469 ntBASIC5.45□□□□□ -1.54
Syne3Q4FZC9 Gm11805-201ENSMUST00000121238 600 ntBASIC5.45□□□□□ -1.54
Syne3Q4FZC9 Gm11200-201ENSMUST00000121698 448 ntBASIC5.45□□□□□ -1.54
Syne3Q4FZC9 Gm13131-201ENSMUST00000122228 321 ntBASIC5.45□□□□□ -1.54
Syne3Q4FZC9 Gm25176-201ENSMUST00000122640 125 ntBASIC5.45□□□□□ -1.54
Syne3Q4FZC9 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC5.45□□□□□ -1.54
Syne3Q4FZC9 Gm26352-201ENSMUST00000158223 125 ntBASIC5.45□□□□□ -1.54
Syne3Q4FZC9 Gm24875-201ENSMUST00000158888 104 ntBASIC5.45□□□□□ -1.54
Syne3Q4FZC9 Gm25348-201ENSMUST00000158961 111 ntBASIC5.45□□□□□ -1.54
Syne3Q4FZC9 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC5.45□□□□□ -1.54
Syne3Q4FZC9 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC5.45□□□□□ -1.54
Syne3Q4FZC9 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Syne3Q4FZC9 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC5.45□□□□□ -1.54
Syne3Q4FZC9 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Syne3Q4FZC9 Gm37837-201ENSMUST00000191743 604 ntBASIC5.45□□□□□ -1.54
Syne3Q4FZC9 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Syne3Q4FZC9 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC5.45□□□□□ -1.54
Syne3Q4FZC9 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Syne3Q4FZC9 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Syne3Q4FZC9 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Syne3Q4FZC9 Gm43171-201ENSMUST00000199882 291 ntBASIC5.45□□□□□ -1.54
Syne3Q4FZC9 Gm19761-201ENSMUST00000205372 391 ntBASIC5.45□□□□□ -1.54
Syne3Q4FZC9 Gm5338-201ENSMUST00000209530 639 ntBASIC5.45□□□□□ -1.54
Syne3Q4FZC9 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC5.45□□□□□ -1.54
Syne3Q4FZC9 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Syne3Q4FZC9 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC5.45□□□□□ -1.54
Syne3Q4FZC9 Gm5457-201ENSMUST00000022260 333 ntBASIC5.45□□□□□ -1.54
Syne3Q4FZC9 AC154467.1-201ENSMUST00000227527 449 ntBASIC5.45□□□□□ -1.54
Syne3Q4FZC9 AC129208.2-201ENSMUST00000228506 320 ntBASIC5.45□□□□□ -1.54
Syne3Q4FZC9 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Syne3Q4FZC9 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC5.45□□□□□ -1.54
Syne3Q4FZC9 Gm23459-201ENSMUST00000083259 131 ntBASIC5.45□□□□□ -1.54
Syne3Q4FZC9 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Syne3Q4FZC9 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Syne3Q4FZC9 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Syne3Q4FZC9 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC5.45□□□□□ -1.54
Syne3Q4FZC9 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Syne3Q4FZC9 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Syne3Q4FZC9 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC5.45□□□□□ -1.54
Syne3Q4FZC9 Gm43498-201ENSMUST00000202002 1486 ntBASIC5.45□□□□□ -1.54
Syne3Q4FZC9 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Syne3Q4FZC9 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Syne3Q4FZC9 Gm19131-202ENSMUST00000203464 3208 ntBASIC5.44□□□□□ -1.54
Syne3Q4FZC9 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Syne3Q4FZC9 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Syne3Q4FZC9 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
Syne3Q4FZC9 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
Syne3Q4FZC9 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
Syne3Q4FZC9 Slfn14-201ENSMUST00000163961 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Syne3Q4FZC9 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Syne3Q4FZC9 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
Syne3Q4FZC9 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Syne3Q4FZC9 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Syne3Q4FZC9 Gm24429-201ENSMUST00000104076 132 ntBASIC5.44□□□□□ -1.54
Syne3Q4FZC9 Gm24350-201ENSMUST00000104163 133 ntBASIC5.44□□□□□ -1.54
Syne3Q4FZC9 Gm16082-201ENSMUST00000115992 377 ntBASIC5.44□□□□□ -1.54
Syne3Q4FZC9 Gm11913-201ENSMUST00000119094 336 ntBASIC5.44□□□□□ -1.54
Syne3Q4FZC9 Gm14506-201ENSMUST00000121165 536 ntBASIC5.44□□□□□ -1.54
Syne3Q4FZC9 Gm14695-201ENSMUST00000121721 282 ntBASIC5.44□□□□□ -1.54
Syne3Q4FZC9 Gm15111-201ENSMUST00000122142 878 ntBASIC5.44□□□□□ -1.54
Syne3Q4FZC9 Gm22804-201ENSMUST00000158052 101 ntBASIC5.44□□□□□ -1.54
Syne3Q4FZC9 Gm24734-201ENSMUST00000158860 262 ntBASIC5.44□□□□□ -1.54
Syne3Q4FZC9 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC5.44□□□□□ -1.54
Syne3Q4FZC9 Gm28560-201ENSMUST00000186091 315 ntBASIC5.44□□□□□ -1.54
Syne3Q4FZC9 Gm28334-201ENSMUST00000186653 315 ntBASIC5.44□□□□□ -1.54
Syne3Q4FZC9 Gm29563-201ENSMUST00000187249 496 ntBASIC5.44□□□□□ -1.54
Syne3Q4FZC9 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC5.44□□□□□ -1.54
Syne3Q4FZC9 Gm28495-201ENSMUST00000188452 315 ntBASIC5.44□□□□□ -1.54
Syne3Q4FZC9 Gm28232-201ENSMUST00000188683 315 ntBASIC5.44□□□□□ -1.54
Syne3Q4FZC9 Gm28481-201ENSMUST00000189231 315 ntBASIC5.44□□□□□ -1.54
Syne3Q4FZC9 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC5.44□□□□□ -1.54
Syne3Q4FZC9 Gm29059-201ENSMUST00000191534 315 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms