Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Mrpl40Q9Z2Q5 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.52■□□□□ 0.4
Mrpl40Q9Z2Q5 Mir1199-201ENSMUST00000117015 119 ntBASIC17.52■□□□□ 0.4
Mrpl40Q9Z2Q5 Gm13836-201ENSMUST00000121159 501 ntBASIC17.52■□□□□ 0.4
Mrpl40Q9Z2Q5 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Mrpl40Q9Z2Q5 Gm37055-201ENSMUST00000191866 133 ntBASIC17.52■□□□□ 0.4
Mrpl40Q9Z2Q5 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Mrpl40Q9Z2Q5 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Mrpl40Q9Z2Q5 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mrpl40Q9Z2Q5 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mrpl40Q9Z2Q5 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mrpl40Q9Z2Q5 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mrpl40Q9Z2Q5 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Mrpl40Q9Z2Q5 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Mrpl40Q9Z2Q5 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.51■□□□□ 0.39
Mrpl40Q9Z2Q5 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mrpl40Q9Z2Q5 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Mrpl40Q9Z2Q5 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Mrpl40Q9Z2Q5 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Mrpl40Q9Z2Q5 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mrpl40Q9Z2Q5 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mrpl40Q9Z2Q5 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mrpl40Q9Z2Q5 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Mrpl40Q9Z2Q5 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.5■□□□□ 0.39
Mrpl40Q9Z2Q5 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mrpl40Q9Z2Q5 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mrpl40Q9Z2Q5 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Mrpl40Q9Z2Q5 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Mrpl40Q9Z2Q5 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.5■□□□□ 0.39
Mrpl40Q9Z2Q5 Gm15565-201ENSMUST00000118890 427 ntBASIC17.5■□□□□ 0.39
Mrpl40Q9Z2Q5 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Mrpl40Q9Z2Q5 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mrpl40Q9Z2Q5 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Mrpl40Q9Z2Q5 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.5■□□□□ 0.39
Mrpl40Q9Z2Q5 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mrpl40Q9Z2Q5 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mrpl40Q9Z2Q5 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Mrpl40Q9Z2Q5 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mrpl40Q9Z2Q5 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mrpl40Q9Z2Q5 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mrpl40Q9Z2Q5 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Mrpl40Q9Z2Q5 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Mrpl40Q9Z2Q5 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Mrpl40Q9Z2Q5 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mrpl40Q9Z2Q5 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Mrpl40Q9Z2Q5 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mrpl40Q9Z2Q5 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mrpl40Q9Z2Q5 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mrpl40Q9Z2Q5 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mrpl40Q9Z2Q5 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Mrpl40Q9Z2Q5 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mrpl40Q9Z2Q5 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mrpl40Q9Z2Q5 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Mrpl40Q9Z2Q5 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mrpl40Q9Z2Q5 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mrpl40Q9Z2Q5 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
Mrpl40Q9Z2Q5 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mrpl40Q9Z2Q5 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.48■□□□□ 0.39
Mrpl40Q9Z2Q5 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Mrpl40Q9Z2Q5 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.48■□□□□ 0.39
Mrpl40Q9Z2Q5 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.48■□□□□ 0.39
Mrpl40Q9Z2Q5 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mrpl40Q9Z2Q5 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mrpl40Q9Z2Q5 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Mrpl40Q9Z2Q5 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.48■□□□□ 0.39
Mrpl40Q9Z2Q5 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Mrpl40Q9Z2Q5 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mrpl40Q9Z2Q5 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Mrpl40Q9Z2Q5 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mrpl40Q9Z2Q5 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mrpl40Q9Z2Q5 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Mrpl40Q9Z2Q5 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Mrpl40Q9Z2Q5 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mrpl40Q9Z2Q5 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mrpl40Q9Z2Q5 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mrpl40Q9Z2Q5 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
Mrpl40Q9Z2Q5 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mrpl40Q9Z2Q5 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.47■□□□□ 0.39
Mrpl40Q9Z2Q5 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mrpl40Q9Z2Q5 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Mrpl40Q9Z2Q5 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mrpl40Q9Z2Q5 Zfp783-201ENSMUST00000095946 670 ntBASIC17.47■□□□□ 0.39
Mrpl40Q9Z2Q5 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Mrpl40Q9Z2Q5 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Mrpl40Q9Z2Q5 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mrpl40Q9Z2Q5 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Mrpl40Q9Z2Q5 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mrpl40Q9Z2Q5 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Mrpl40Q9Z2Q5 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Mrpl40Q9Z2Q5 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Mrpl40Q9Z2Q5 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mrpl40Q9Z2Q5 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Mrpl40Q9Z2Q5 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mrpl40Q9Z2Q5 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mrpl40Q9Z2Q5 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mrpl40Q9Z2Q5 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mrpl40Q9Z2Q5 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Mrpl40Q9Z2Q5 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mrpl40Q9Z2Q5 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Mrpl40Q9Z2Q5 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms